RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 FAM214AQ32MH5 1076 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 FAM209AQ5JX71 171 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 SERPINA13PQ6UXR4 307 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 DCAF4L2Q8NA75 395 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 HHIPQ96QV1 700 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 ELOVL6Q9H5J4 265 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 PLCXD1Q9NUJ7 323 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 MS4A12Q9NXJ0 267 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 TRBV5-4A0A0C4DH59 114 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 MAGEB17A8MXT2 336 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 GCM2O75603 506 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 ETV6P41212 452 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 PTSQ03393 145 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 HSPA14Q0VDF9 509 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 CDK10Q15131 360 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 CCDC58Q4VC31 144 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 PPP2R2DQ66LE6 453 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 ATCAYQ86WG3 371 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 GALNT12Q8IXK2 581 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 FAM217AQ8IXS0 508 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 CMTM8Q8IZV2 173 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 NXPE1Q8N323 547 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 B3GNT7Q8NFL0 401 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 VANGL1Q8TAA9 524 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 SKA2Q8WVK7 121 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 NELL1Q92832 810 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 FOXJ1Q92949 421 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 VWCEQ96DN2 955 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 COL21A1Q96P44 957 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 TRNT1Q96Q11 434 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 SNX18Q96RF0 628 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 MCCC1Q96RQ3 725 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 SLC30A2Q9BRI3 323 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 BEX2Q9BXY8 128 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 BARHL1Q9BZE3 327 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 MMP28Q9H239 520 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 RETREG1Q9H6L5 497 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 CFAP97Q9P2B7 532 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 PCDHGA2Q9Y5H1 932 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 CAPN5O15484 640 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 RGS5O15539 181 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 GPX5O75715 221 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 EPN2O95208 641 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 SNX4O95219 450 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 HOXB6P17509 224 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 RPS3P23396 243 aaKnown RBP eCLIP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 AP1S1P61966 158 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 CSNK2BP67870 215 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 NOXRED1Q6NXP6 359 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 ZNF517Q6ZMY9 492 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 RNF165Q6ZSG1 346 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 GPR155Q7Z3F1 870 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 PGBD3Q8N328 593 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 OR9Q2Q8NGE9 314 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 DEPDC7Q96QD5 511 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 EPYCQ99645 322 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 NDUFAF4Q9P032 175 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 SH3BGRLO75368 114 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 ABCB1P08183 1280 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 LAMP1P11279 417 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 PRPS2P11908 318 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 RPIAP49247 311 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 PPIGQ13427 754 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 STARD3Q14849 445 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 TAB1Q15750 504 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 SSX1Q16384 188 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 TBRG1Q3YBR2 411 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 CACTIN-AS1Q8N1I8 211 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 CHCHD4Q8N4Q1 142 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 SPPL2AQ8TCT8 520 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 GPR151Q8TDV0 419 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 FYTTD1Q96QD9 318 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 RAD9AQ99638 391 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 ARL15Q9NXU5 204 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 GPSM3Q9Y4H4 160 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 INSL5Q9Y5Q6 135 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 KCNE1BA0A087WTH5 132 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 PRAMEF25A6NGN4 478 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 CENPXA8MT69 81 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 TNFRSF11BO00300 401 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 SOD2P04179 222 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 CKMP06732 381 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 CHRNB1P11230 501 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 AMD1P17707 334 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 ITPKAP23677 461 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 GABRR2P28476 465 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 MTAPQ13126 283 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 MADCAM1Q13477 382 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 VEPH1Q14D04 833 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 MLIPQ5VWP3 458 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 NEK5Q6P3R8 708 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 ZNF783Q6ZMS7 281 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 MACC1Q6ZN28 852 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 ZNF605Q86T29 641 aa12.8□□□□□ -0.36
PDZRN3-208ENST00000479530 SYNPOQ8N3V7 929 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms