RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 NPLQ9BXD5 320 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 TRPC4Q9UBN4 977 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 LGALS13Q9UHV8 139 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 MRPS2Q9Y399 296 aaKnown RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 PCDHGB7Q9Y5F8 929 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 PCDHGA9Q9Y5G4 932 aaKnown RBP14.66□□□□□ -0.06
C9orf3-217ENST00000479161 PCDHGA11Q9Y5H2 935 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 MAU2Q9Y6X3 613 aa14.66□□□□□ -0.06
C9orf3-217ENST00000479161 BOD1L1Q8NFC6 3051 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 A0A088AWK7 358 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 PEX12O00623 359 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 GLRA3O75311 464 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 KLHL18O94889 574 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 BMP10O95393 424 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 PYGBP11216 843 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 TAC1P20366 129 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 ZNF10P21506 573 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-217ENST00000479161 CRHR1P34998 444 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 KLC1Q07866 573 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 GTF2H2Q13888 395 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 TMEM35AQ53FP2 167 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 ATP1A1-AS1Q5TC04 95 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 GTF2H2CQ6P1K8 395 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 MED27Q6P2C8 311 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 PPP1R32Q7Z5V6 425 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 PDSS2Q86YH6 399 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 HPS6Q86YV9 775 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 SLC22A9Q8IVM8 553 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.65□□□□□ -0.06
C9orf3-217ENST00000479161 TEX9Q8N6V9 391 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 PTGR2Q8N8N7 351 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-217ENST00000479161 EXD3Q8N9H8 876 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 MYRIPQ8NFW9 859 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 OR51Q1Q8NH59 317 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 REPS1Q96D71 796 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 CCDC126Q96EE4 140 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 MOCOSQ96EN8 888 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 BBC3Q96PG8 261 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-217ENST00000479161 ING2Q9H160 280 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 IPPKQ9H8X2 491 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 MLXIPLQ9NP71 852 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 MKS1Q9NXB0 559 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 TMEM216Q9P0N5 145 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 CPSF2Q9P2I0 782 aaKnown RBP14.65□□□□□ -0.06
C9orf3-217ENST00000479161 TBK1Q9UHD2 729 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 GRID1Q9ULK0 1009 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 ANGPTL3Q9Y5C1 460 aa14.65□□□□□ -0.06
C9orf3-217ENST00000479161 BSNQ9UPA5 3926 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 CFAP46Q8IYW2 2715 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 LOC102723996A0A087X1L8 192 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 MKRN2OSH3BPM6 223 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 TBX6O95947 436 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-217ENST00000479161 RPS17P08708 135 aaKnown RBP14.64□□□□□ -0.07
C9orf3-217ENST00000479161 IL1RNP18510 177 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 ATP5F1P24539 256 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-217ENST00000479161 TSFMP43897 325 aaKnown RBP14.64□□□□□ -0.07
C9orf3-217ENST00000479161 HERVK_113P63132 956 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 SLC18A2Q05940 514 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 TGM3Q08188 693 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 KCNAB2Q13303 367 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 CCDC153Q494R4 210 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 GGTA1PQ4G0N0 100 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 FBXO48Q5FWF7 155 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 VWA2Q5GFL6 755 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 TCTN3Q6NUS6 607 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 VN1R5Q7Z5H4 357 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 ZC3H7AQ8IWR0 971 aaKnown RBP14.64□□□□□ -0.07
C9orf3-217ENST00000479161 DTWD1Q8N5C7 304 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 METTL27Q8N6F8 245 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-217ENST00000479161 OR2L5Q8NG80 312 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 OR7G3Q8NG95 312 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 ZNF473Q8WTR7 871 aaKnown RBP14.64□□□□□ -0.07
C9orf3-217ENST00000479161 MS4A6EQ96DS6 147 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 CRB3Q9BUF7 120 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 ERVK-6Q9BXR3 956 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 ROGDIQ9GZN7 287 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 P4HTMQ9NXG6 502 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 PCTPQ9UKL6 214 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 NAALAD2Q9Y3Q0 740 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 HS3ST3B1Q9Y662 390 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 CNTRLQ7Z7A1 2325 aa14.64□□□□□ -0.07
C9orf3-217ENST00000479161 SCN2AQ99250 2005 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 A0A1W2PPM1 405 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 SYNDIG1LA6NDD5 238 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 A8MT66 165 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 IDSB3KWA1 339 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 FOXE1O00358 373 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-217ENST00000479161 SOCS6O14544 535 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 SIX3O95343 332 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-217ENST00000479161 KRT15P19012 456 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 EEF1DP29692 281 aaKnown RBP14.63□□□□□ -0.07
C9orf3-217ENST00000479161 OTX2P32243 289 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 EMP2P54851 167 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 SNRPNP63162 240 aaKnown RBP14.63□□□□□ -0.07
C9orf3-217ENST00000479161 DCAF10Q5QP82 559 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 TMEM205Q6UW68 189 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 KIRREL2Q6UWL6 708 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 PRSS41Q7RTY9 318 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 GOLGA7Q7Z5G4 137 aa14.63□□□□□ -0.07
C9orf3-217ENST00000479161 CYP4X1Q8N118 509 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms