RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TTC16Q8NEE8 873 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 LYARQ9NX58 379 aaKnown RBP20.47■□□□□ 0.87
SDF4-206ENST00000478938 FAM50BQ9Y247 325 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 MAB21L2Q9Y586 359 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 HYKKA2RU49 373 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 LINC00587B1AMM8 73 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 TEX46H3BTG2 121 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 LDOC1O95751 146 aaPredicted RBP20.47■□□□□ 0.87
SDF4-206ENST00000478938 WDPCPO95876 746 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 SEMG1P04279 462 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 SYPP08247 313 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 LMO2P25791 158 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 CAV3P56539 151 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 HSF2Q03933 536 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 ABRAXAS2Q15018 415 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 PAN2Q504Q3 1202 aaKnown RBP20.47■□□□□ 0.87
SDF4-206ENST00000478938 CDC26Q8NHZ8 85 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 FUBP1Q96AE4 644 aaKnown RBP20.47■□□□□ 0.87
SDF4-206ENST00000478938 DPY30Q9C005 99 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 NXF3Q9H4D5 531 aaKnown RBP20.47■□□□□ 0.87
SDF4-206ENST00000478938 COMMD3Q9UBI1 195 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 SEC14L4Q9UDX3 406 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 TNFSF13BQ9Y275 285 aa20.47■□□□□ 0.87
SDF4-206ENST00000478938 UBR3Q6ZT12 1888 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 HRO43593 1189 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 LZTS3O60299 673 aaPredicted RBP20.46■□□□□ 0.87
SDF4-206ENST00000478938 HOXB6P17509 224 aaKnown RBP20.46■□□□□ 0.87
SDF4-206ENST00000478938 RPL34P49207 117 aaKnown RBP20.46■□□□□ 0.87
SDF4-206ENST00000478938 PDE12Q6L8Q7 609 aaKnown RBP20.46■□□□□ 0.87
SDF4-206ENST00000478938 MSANTD2Q6P1R3 559 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 SLC5A11Q8WWX8 675 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 TMEM203Q969S6 136 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 ADAM30Q9UKF2 790 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 BTAF1O14981 1849 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 RNGTTO60942 597 aaKnown RBP20.46■□□□□ 0.87
SDF4-206ENST00000478938 INPP1P49441 399 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 HOXA1P49639 335 aaPredicted RBP20.46■□□□□ 0.87
SDF4-206ENST00000478938 PCDH1Q08174 1060 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 ZNF628Q5EBL2 1059 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 ZNF57Q68EA5 555 aaPredicted RBP20.46■□□□□ 0.87
SDF4-206ENST00000478938 C22orf42Q6IC83 251 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 TMEM107Q6UX40 140 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 RASSF6Q6ZTQ3 369 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 ATPAF2Q8N5M1 289 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 SLC5A8Q8N695 610 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 CLRN3Q8NCR9 226 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 OR4F6Q8NGB9 312 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 TRAPPC12Q8WVT3 735 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 COPS5Q92905 334 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 TPD52L3Q96J77 140 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 CXorf58Q96LI9 332 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 MFSD1Q9H3U5 465 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 ANKRA2Q9H9E1 313 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 FOLH1BQ9HBA9 442 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 EMC7Q9NPA0 242 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 OR12D3Q9UGF7 316 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 PCDHGA2Q9Y5H1 932 aa20.46■□□□□ 0.87
SDF4-206ENST00000478938 CSKP41240 450 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 CDKN2CP42773 168 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 AP1S2P56377 157 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 IL18Q14116 193 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 HSD17B12Q53GQ0 312 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 DACT2Q5SW24 774 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 STRIP1Q5VSL9 837 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 PLAG1Q6DJT9 500 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 TMPRSS9Q7Z410 1059 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 PDZD3Q86UT5 571 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 DENND6BQ8NEG7 585 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 OR9Q1Q8NGQ5 310 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 CREB3L1Q96BA8 519 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 TMEM43Q9BTV4 400 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 PPP1R3EQ9H7J1 279 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 SLC39A1Q9NY26 324 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 SSR3Q9UNL2 185 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 BTN3A1O00481 513 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 ANXA3P12429 323 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 SRCP12931 536 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 ITGB7P26010 798 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 MBTD1Q05BQ5 628 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 LTB4RQ15722 352 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 LIPKQ5VXJ0 399 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 OVCH2Q7RTZ1 564 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 YIPF5Q969M3 257 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 MYLPFQ96A32 169 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 RNF19AQ9NV58 838 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 RBM22Q9NW64 420 aaKnown RBP eCLIP20.45■□□□□ 0.86
SDF4-206ENST00000478938 FNIP2Q9P278 1114 aa20.45■□□□□ 0.86
SDF4-206ENST00000478938 PPIEQ9UNP9 301 aaKnown RBP20.45■□□□□ 0.86
SDF4-206ENST00000478938 TRAV20A0A0B4J274 112 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 E2F3O00716 465 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 CSO75390 466 aaKnown RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 GLAP06280 429 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 PRSS56P0CW18 603 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 SLC2A3P11169 496 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 DARSP14868 501 aaKnown RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 KCTD2Q14681 263 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 SF3A2Q15428 464 aaKnown RBP20.44■□□□□ 0.86
SDF4-206ENST00000478938 DOK6Q6PKX4 331 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 MAMSTRQ6ZN01 415 aa20.44■□□□□ 0.86
SDF4-206ENST00000478938 MOB2Q70IA6 237 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms