RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SNRPNP63162 240 aaKnown RBP25.43■■□□□ 1.66
CCM2-211ENST00000478582 COL9A2Q14055 689 aaPredicted RBP25.43■■□□□ 1.66
CCM2-211ENST00000478582 PCLAFQ15004 111 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 TBR1Q16650 682 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 GGTA1PQ4G0N0 100 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 MRPL14Q6P1L8 145 aaKnown RBP25.43■■□□□ 1.66
CCM2-211ENST00000478582 DTWD1Q8N5C7 304 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 FKBP10Q96AY3 582 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 VIPAS39Q9H9C1 493 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 IFT80Q9P2H3 777 aaPredicted RBP25.43■■□□□ 1.66
CCM2-211ENST00000478582 IL17BQ9UHF5 180 aa25.43■■□□□ 1.66
CCM2-211ENST00000478582 FARSAQ9Y285 508 aaKnown RBP25.43■■□□□ 1.66
CCM2-211ENST00000478582 H0YIG0 161 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 NSA2O95478 260 aaKnown RBP25.42■■□□□ 1.66
CCM2-211ENST00000478582 TBX6O95947 436 aaPredicted RBP25.42■■□□□ 1.66
CCM2-211ENST00000478582 ALBP02768 609 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 SMIM10L1P0DMW3 83 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 PTPN4P29074 926 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 ETV4P43268 484 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 OR1D4P47884 311 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 HERC3Q15034 1050 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 NCF4Q15080 339 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 ADPRMQ3LIE5 342 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 LIPMQ5VYY2 423 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 NIPAL1Q6NVV3 410 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 COX15Q7KZN9 410 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 OVCH1Q7RTY7 1134 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 MILR1Q7Z6M3 343 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 ZNF843Q8N446 348 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 TRPC4APQ8TEL6 797 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 ZNF473Q8WTR7 871 aaKnown RBP25.42■■□□□ 1.66
CCM2-211ENST00000478582 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.42■■□□□ 1.66
CCM2-211ENST00000478582 ZBTB9Q96C00 473 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 REPS1Q96D71 796 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 SMIM10Q96HG1 83 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 CDK15Q96Q40 435 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 ARHGAP9Q9BRR9 750 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 SEMA4CQ9C0C4 833 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 SLC26A1Q9H2B4 701 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 GSTO2Q9H4Y5 243 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 STK38LQ9Y2H1 464 aa25.42■■□□□ 1.66
CCM2-211ENST00000478582 SMG1Q96Q15 3661 aaKnown RBP25.42■■□□□ 1.66
CCM2-211ENST00000478582 A0A0A6YYC8 382 aaPredicted RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 LRIT2A6NDA9 550 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 I3L1I5 382 aaPredicted RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 PPP6CO00743 305 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 NKX2-8O15522 239 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 MLYCDO95822 493 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 RECKO95980 971 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 ALOX12P18054 663 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 HPDP32754 393 aaPredicted RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 PIK3CBP42338 1070 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 AVPR1BP47901 424 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 STXBP1P61764 594 aaKnown RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 DSG2Q14126 1118 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 RBBP7Q16576 425 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 ADNP2Q6IQ32 1131 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 ABHD13Q7L211 337 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 MYLK4Q86YV6 388 aaPredicted RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 C10orf107Q8IVU9 208 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 EXD3Q8N9H8 876 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 OR4F6Q8NGB9 312 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 UTP15Q8TED0 518 aaKnown RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 MMABQ96EY8 250 aaPredicted RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 PKNOX2Q96KN3 472 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 ZNF382Q96SR6 550 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 AICDAQ9GZX7 198 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 ANKHQ9HCJ1 492 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 GPN3Q9UHW5 284 aaPredicted RBP25.41■■□□□ 1.66
CCM2-211ENST00000478582 MAU2Q9Y6X3 613 aa25.41■■□□□ 1.66
CCM2-211ENST00000478582 ATRXP46100 2492 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 A0A1B0GTL3 188 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 TRIM13O60858 407 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 TSPAN8P19075 237 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 NAGLUP54802 743 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 MC1RQ01726 317 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 ASPHQ12797 758 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 LCP2Q13094 533 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 CPSF6Q16630 551 aaKnown RBP eCLIP25.4■■□□□ 1.66
CCM2-211ENST00000478582 CRTC2Q53ET0 693 aaPredicted RBP25.4■■□□□ 1.66
CCM2-211ENST00000478582 C10orf62Q5T681 223 aaPredicted RBP25.4■■□□□ 1.66
CCM2-211ENST00000478582 MLIPQ5VWP3 458 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 METTL27Q8N6F8 245 aaPredicted RBP25.4■■□□□ 1.66
CCM2-211ENST00000478582 CCNYL1Q8N7R7 359 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 ENDOVQ8N8Q3 282 aaKnown RBP25.4■■□□□ 1.66
CCM2-211ENST00000478582 OR9A4Q8NGU2 314 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 ZCCHC10Q8TBK6 192 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 WDR20Q8TBZ3 569 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 COL26A1Q96A83 441 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 TLCD1Q96CP7 247 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 CATSPER2Q96P56 530 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 KLHL31Q9H511 634 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 WDR54Q9H977 334 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 ACSS2Q9NR19 701 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 PSD3Q9NYI0 1048 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 TRPS1Q9UHF7 1281 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 ZNF225Q9UK10 706 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 FER1L5A0AVI2 2057 aa25.4■■□□□ 1.66
CCM2-211ENST00000478582 IGLV3-12A0A075B6K2 115 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 TM9SF1O15321 606 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms