RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 CDKL1Q00532 357 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 REEP5Q00765 189 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 TIAL1Q01085 375 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 ALDH6A1Q02252 535 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 MGAT5Q09328 741 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 TUBA3CQ13748 450 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 STEAP4Q687X5 459 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 TUBA3EQ6PEY2 450 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 QSOX2Q6ZRP7 698 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 TMPRSS11BQ86T26 416 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 CRLF3Q8IUI8 442 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF808Q8N4W9 903 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 BBOF1Q8ND07 529 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 ADAMTS18Q8TE60 1221 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 THAP3Q8WTV1 239 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 TMEM125Q96AQ2 219 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 SEC16BQ96JE7 1060 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 FAR2Q96K12 515 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 TXNDC16Q9P2K2 825 aa13.59□□□□□ -0.23
SMARCE1-209ENST00000478349 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 CHST10O43529 356 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 PRMT3O60678 531 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 SLC19A2O60779 497 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 H2AFYO75367 372 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 BANF1O75531 89 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 ZNF888P0CJ79 500 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 ESRRAP11474 423 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 GNAZP19086 355 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 SMSP52788 366 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 SRSF11Q05519 484 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 RCN2Q14257 317 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 MSS51Q4VC12 460 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 THOC6Q86W42 341 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 KLHL7Q8IXQ5 586 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 MDS2Q8NDY4 140 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 CDKL2Q92772 493 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 TSNARE1Q96NA8 513 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 PTCHD1Q96NR3 888 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 PITHD1Q9GZP4 211 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 CNOT10Q9H9A5 744 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 POPDC3Q9HBV1 291 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 PRDM9Q9NQV7 894 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 LANCL2Q9NS86 450 aa13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 MRPS33Q9Y291 106 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-209ENST00000478349 CNTRLQ7Z7A1 2325 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 FAM95CA0A1B0GW59 222 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 SAGE2PA6NJ88 616 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 FAM227AF5H4B4 570 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 B4GALT2O60909 372 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 SERPINA6P08185 405 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 SAT1P21673 171 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 CYB561P49447 251 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 EFNA3P52797 238 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 RBBP5Q15291 538 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 TERF2Q15554 542 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 PPP1R3AQ16821 1122 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 CATSPEREQ5SY80 951 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 FCRLBQ6BAA4 426 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 XKRXQ6PP77 449 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 NXPE4Q6UWF7 544 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 SBSNQ6UWP8 590 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 BNC2Q6ZN30 1099 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 RPS19BP1Q86WX3 136 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 CYP4X1Q8N118 509 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 KRT78Q8N1N4 520 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 TCAIMQ8N3R3 496 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 OR5T3Q8NGG3 340 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 TSLPQ969D9 159 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 TSPAN17Q96FV3 270 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 SCMH1Q96GD3 660 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 CAPZA3Q96KX2 299 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 OR4K3Q96R72 315 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 OLFM1Q99784 485 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 SLC6A16Q9GZN6 736 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 LRFN1Q9P244 771 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 RNF14Q9UBS8 474 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 CTNNAL1Q9UBT7 734 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 MMACHCQ9Y4U1 282 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 OARD1Q9Y530 152 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 TEX264Q9Y6I9 313 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 CCDC88CQ9P219 2028 aa13.57□□□□□ -0.24
SMARCE1-209ENST00000478349 ARHGAP10A1A4S6 786 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 ASPDHA6ND91 283 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 NPEPPSL1A6NEC2 478 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 CLDN4O14493 209 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 SLC25A12O75746 678 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 SEC31AO94979 1220 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 ZNF24P17028 368 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 AGAP20933 346 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 MST1P26927 711 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 PTGER4P35408 488 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 CD96P40200 585 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 ITGA8P53708 1063 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 TGM3Q08188 693 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms