RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 APRTP07741 180 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 SLC35G6P0C7Q6 338 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 STIP1P31948 543 aaKnown RBP18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 SKIV2L2P42285 1042 aaKnown RBP18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 MEF2AQ02078 507 aaPredicted RBP18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 HERC3Q15034 1050 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 RPS6KA1Q15418 735 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 SPA17Q15506 151 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 SKOR2Q2VWA4 1001 aaPredicted RBP18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 GXYLT1Q4G148 440 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 B3GNT6Q6ZMB0 384 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 QSOX2Q6ZRP7 698 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 Q71RC1 249 aaPredicted RBP18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 SDCCAG8Q86SQ7 713 aaPredicted RBP18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 CDC20BQ86Y33 519 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 CYP4X1Q8N118 509 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 LRRC57Q8N9N7 239 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 WFDC11Q8NEX6 87 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 CREB3L4Q8TEY5 395 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 SLC13A3Q8WWT9 602 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 ASB11Q8WXH4 323 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 ATG4AQ8WYN0 398 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 C18orf12Q96KH6 178 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 PWWP2AQ96N64 755 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 TCF12Q99081 682 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 ZDHHC11Q9H8X9 412 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 CCDC177Q9NQR7 707 aaPredicted RBP18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 RAB6BQ9NRW1 208 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 Q9UFV3 132 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 DUSP10Q9Y6W6 482 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 OR14I1A6ND48 311 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 E5RI56 91 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 BCKDKO14874 412 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 GALR3O60755 368 aaPredicted RBP18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 TUBB4AP04350 444 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 GLI4P10075 376 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 NMBRP28336 390 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 KIR2DL3P43628 341 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 CLCN7P51798 805 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 SESN2P58004 480 aaPredicted RBP18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 TBPL1P62380 186 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 CAPN13Q6MZZ7 669 aaPredicted RBP18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 TMEM156Q8N614 296 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 APCDD1LQ8NCL9 501 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 OR5M9Q8NGP3 310 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 GOT1L1Q8NHS2 421 aaPredicted RBP18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 IL22Q9GZX6 179 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 TIMMDC1Q9NPL8 285 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 DEPPQ9NTK1 212 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 CRIM1Q9NZV1 1036 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 SH2B3Q9UQQ2 575 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 CRYL1Q9Y2S2 319 aa18.88■□□□□ 0.61
PDLIM1-202ENST00000477757 IGKV3D-11A0A0A0MRZ8 115 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 TCRBV16S1A1N1A0A5B0 115 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 A6NNC1 897 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 GFYI3L273 518 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 PFDN6O15212 129 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 ITGA10O75578 1167 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 VAPBO95292 243 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 IFNB1P01574 187 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 PEX19P40855 299 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 PPIAP62937 165 aaKnown RBP18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 TBX2Q13207 712 aaPredicted RBP18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 OASLQ15646 514 aaKnown RBP18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 TTLL9Q3SXZ7 439 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 RTL6Q6ICC9 239 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 KIAA0408Q6ZU52 694 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 LIX1LQ8IVB5 337 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 GIMAP7Q8NHV1 300 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 PTCHD1Q96NR3 888 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 SMC6Q96SB8 1091 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 SLC30A3Q99726 388 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 PCBD2Q9H0N5 130 aa18.87■□□□□ 0.61
PDLIM1-202ENST00000477757 TRBV11-1A0A0K0K1C0 115 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 GRID2IPA4D2P6 1211 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 FAM166BA8MTA8 275 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 ACOT7O00154 380 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 CHST10O43529 356 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 LCMT2O60294 686 aaKnown RBP18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 B4GALT2O60909 372 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 ADH7P40394 386 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 SKP1P63208 163 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 RGS9BPQ6ZS82 235 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 PRELID2Q8N945 189 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 PSD4Q8NDX1 1056 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 ZNF740Q8NDX6 193 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 ARSGQ96EG1 525 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 MDFIQ99750 246 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 SARGQ9BW04 601 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 DMRT3Q9NQL9 472 aa18.86■□□□□ 0.61
PDLIM1-202ENST00000477757 CSPG4Q6UVK1 2322 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 STAB1Q9NY15 2570 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 PINLYPA6NC86 204 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 GOLGA8KD6RF30 607 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 GOLGA8TH3BQL2 631 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 LIASO43766 372 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 ZBTB14O43829 449 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 DNAJB6O75190 326 aa18.85■□□□□ 0.61
PDLIM1-202ENST00000477757 ATE1O95260 518 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms