RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TRIM42Q8IWZ5 723 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 RBMXL3Q8N7X1 1067 aaKnown RBP11.03□□□□□ -0.64
LSM2-212ENST00000477182 OR2A1Q8NGT9 310 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 OR6Y1Q8NGX8 325 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 TRPC4APQ8TEL6 797 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 CT55Q8WUE5 264 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 CKAP2Q8WWK9 683 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 ZNF75CPQ92670 426 aaPredicted RBP11.03□□□□□ -0.64
LSM2-212ENST00000477182 SLC22A18Q96BI1 424 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 PPM1MQ96MI6 270 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 OR2A14Q96R47 310 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 HAUS8Q9BT25 410 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 SHCBP1LQ9BZQ2 653 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 PCBD2Q9H0N5 130 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 NOL11Q9H8H0 719 aaKnown RBP11.03□□□□□ -0.64
LSM2-212ENST00000477182 MANSC1Q9H8J5 431 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 ZNF395Q9H8N7 513 aaPredicted RBP11.03□□□□□ -0.64
LSM2-212ENST00000477182 IPPKQ9H8X2 491 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 LHX9Q9NQ69 397 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 KLHL3Q9UH77 587 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
LSM2-212ENST00000477182 TACC2O95359 2948 aa11.02□□□□□ -0.64
LSM2-212ENST00000477182 TMEM114B3SHH9 223 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 E7EQ34 232 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 OR7A17O14581 309 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 CLGNO14967 610 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 LRRTM2O43300 516 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 ITM2AO43736 263 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 LYPLA1O75608 230 aaPredicted RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 CCNDBP1O95273 360 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 CHRNGP07510 517 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 CDH1P12830 882 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 GRK2P25098 689 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 PTPN4P29074 926 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 PRDX3P30048 256 aaKnown RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 CMPK1P30085 196 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 ARRB2P32121 409 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 ARL1P40616 181 aaPredicted RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 GFERP55789 205 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 ABCE1P61221 599 aaKnown RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 NAA20P61599 178 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 RPS15P62841 145 aaKnown RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 PRDX1Q06830 199 aaKnown RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 FAM92BQ6ZTR7 304 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 TMPRSS11BQ86T26 416 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 CISD2Q8N5K1 135 aaKnown RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 OR2L3Q8NG85 312 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 OR52B6Q8NGF0 335 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 LRRC8CQ8TDW0 803 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 SLC5A11Q8WWX8 675 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 NEIL2Q969S2 332 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 CNDP1Q96KN2 507 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 MAGEB18Q96M61 343 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 TGM7Q96PF1 710 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 OR6C1Q96RD1 312 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 DRC3Q9H069 523 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 SLC6A20Q9NP91 592 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 MRPS30Q9NP92 439 aaKnown RBP11.02□□□□□ -0.65
LSM2-212ENST00000477182 POMT2Q9UKY4 750 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 KLHL20Q9Y2M5 609 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 KCNE2Q9Y6J6 123 aa11.02□□□□□ -0.65
LSM2-212ENST00000477182 NIPBLQ6KC79 2804 aaeCLIP11.01□□□□□ -0.65
LSM2-212ENST00000477182 DNHD1Q96M86 4753 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 A0A0J9YY10 115 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 MATN2O00339 956 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 UBFD1O14562 309 aaKnown RBP11.01□□□□□ -0.65
LSM2-212ENST00000477182 TOX3O15405 576 aaPredicted RBP11.01□□□□□ -0.65
LSM2-212ENST00000477182 PRAMEF4O60810 478 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 HSPA4LO95757 839 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 MLYCDO95822 493 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 FGF5P12034 268 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 PVRP15151 417 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 GNAZP19086 355 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 SERPINB5P36952 375 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 SLC1A6P48664 564 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 CCNG1P51959 295 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 IRF8Q02556 426 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 LCP2Q13094 533 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 TRAF3Q13114 568 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 CHIT1Q13231 466 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 TESK1Q15569 626 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 SLC5A12Q1EHB4 618 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.01□□□□□ -0.65
LSM2-212ENST00000477182 XKR6Q5GH73 641 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 ARL13AQ5H913 290 aaPredicted RBP11.01□□□□□ -0.65
LSM2-212ENST00000477182 CATSPEREQ5SY80 951 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 PRAMEF9Q5VWM5 478 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 FAM219BQ5XKK7 198 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 ATG16L1Q676U5 607 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 SLCO4C1Q6ZQN7 724 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 GPRIN3Q6ZVF9 776 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 ST6GALNAC3Q8NDV1 305 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 FDCSPQ8NFU4 85 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 RAB3IL1Q8TBN0 382 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 ATP6V1E2Q96A05 226 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 ZDHHC12Q96GR4 267 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 CDK15Q96Q40 435 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 ZNF382Q96SR6 550 aa11.01□□□□□ -0.65
LSM2-212ENST00000477182 SMAD5Q99717 465 aaKnown RBP11.01□□□□□ -0.65
LSM2-212ENST00000477182 DPH7Q9BTV6 452 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms