RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 CPNE6O95741 557 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 FABP3P05413 133 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 ITGAMP11215 1152 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 PTX3P26022 381 aaPredicted RBP11.02□□□□□ -0.65
NUP188-205ENST00000477069 TPP2P29144 1249 aaPredicted RBP11.02□□□□□ -0.65
NUP188-205ENST00000477069 HSD17B2P37059 387 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 RPL3P39023 403 aaKnown RBP11.02□□□□□ -0.65
NUP188-205ENST00000477069 YAP1P46937 504 aaKnown RBP11.02□□□□□ -0.65
NUP188-205ENST00000477069 KCNJ10P78508 379 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 HYAL1Q12794 435 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.02□□□□□ -0.65
NUP188-205ENST00000477069 IER5LQ5T953 404 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 R3HCC1LQ7Z5L2 792 aaKnown RBP11.02□□□□□ -0.65
NUP188-205ENST00000477069 SLC9B2Q86UD5 537 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 NAGSQ8N159 534 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 C2orf73Q8N5S3 287 aaPredicted RBP11.02□□□□□ -0.65
NUP188-205ENST00000477069 ANKRD53Q8N9V6 530 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 ABHD11Q8NFV4 315 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 SNX19Q92543 992 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 MCOLN1Q9GZU1 580 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 NKX2-4Q9H2Z4 354 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 DDX18Q9NVP1 670 aaKnown RBP11.02□□□□□ -0.65
NUP188-205ENST00000477069 SPATA7Q9P0W8 599 aa11.02□□□□□ -0.65
NUP188-205ENST00000477069 A0A1W2PP55 124 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 KLHL33A6NCF5 533 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 CCDC160A6NGH7 325 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 PCDH8O95206 1070 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 C6orf47O95873 294 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 KLK1P06870 262 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 GDI1P31150 447 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 POLR2IP36954 125 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 ITGA1P56199 1179 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 TAS2R50P59544 299 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 PHEXP78562 749 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 CTU2Q2VPK5 515 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 ITPRIPL2Q3MIP1 535 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 COX20Q5RI15 118 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 RBM48Q5RL73 367 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 ZNF691Q5VV52 312 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 CYP4Z1Q86W10 505 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 C8orf59Q8N0T1 100 aaPredicted RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 KRT78Q8N1N4 520 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 HDDC3Q8N4P3 179 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 ARL10Q8N8L6 244 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 C7orf34Q96L11 122 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 RPP25Q9BUL9 199 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 ATAD3AQ9NVI7 634 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 TAC3Q9UHF0 121 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 C3orf18Q9UK00 162 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 WDR37Q9Y2I8 494 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 TDRKHQ9Y2W6 561 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 OR1A2Q9Y585 309 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 CFAP20Q9Y6A4 193 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 U3KQV3 271 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 ZNF701M0R085 212 aaPredicted RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 B4GAT1O43505 415 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 HS6ST1O60243 411 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 E2F6O75461 281 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 RPN2P04844 631 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 CRHBPP24387 322 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 ISL1P61371 349 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 REEP5Q00765 189 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 C2orf80Q0P641 193 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 PMS2P3Q13401 168 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 RBBP5Q15291 538 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 ZNF773Q6PK81 442 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 TSEN54Q7Z6J9 526 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 ZNF513Q8N8E2 541 aaPredicted RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 LINC01555Q8NAE3 123 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 CHDHQ8NE62 594 aaPredicted RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 HDAC2Q92769 488 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 MAL2Q969L2 176 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 PPCDCQ96CD2 204 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 SORBS1Q9BX66 1292 aaKnown RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 MS4A8Q9BY19 250 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 WDR26Q9H7D7 661 aa11.01□□□□□ -0.65
NUP188-205ENST00000477069 CUEDC1Q9NWM3 386 aaPredicted RBP11.01□□□□□ -0.65
NUP188-205ENST00000477069 LOC100130705A0A1B0GUX0 176 aa11□□□□□ -0.65
NUP188-205ENST00000477069 E9PQ18 207 aa11□□□□□ -0.65
NUP188-205ENST00000477069 hCG_2039718K7EN88 272 aa11□□□□□ -0.65
NUP188-205ENST00000477069 PLPP1O14494 284 aa11□□□□□ -0.65
NUP188-205ENST00000477069 SEMA3DO95025 777 aa11□□□□□ -0.65
NUP188-205ENST00000477069 IL3P08700 152 aa11□□□□□ -0.65
NUP188-205ENST00000477069 LAMP2P13473 410 aa11□□□□□ -0.65
NUP188-205ENST00000477069 SOX9P48436 509 aa11□□□□□ -0.65
NUP188-205ENST00000477069 EEF1A2Q05639 463 aaKnown RBP11□□□□□ -0.65
NUP188-205ENST00000477069 IL18R1Q13478 541 aa11□□□□□ -0.65
NUP188-205ENST00000477069 MLF2Q15773 248 aaPredicted RBP11□□□□□ -0.65
NUP188-205ENST00000477069 RFX4Q33E94 735 aa11□□□□□ -0.65
NUP188-205ENST00000477069 TMEM259Q4ZIN3 620 aa11□□□□□ -0.65
NUP188-205ENST00000477069 KDM4DQ6B0I6 523 aa11□□□□□ -0.65
NUP188-205ENST00000477069 DUS1LQ6P1R4 473 aaKnown RBP11□□□□□ -0.65
NUP188-205ENST00000477069 GPR141Q7Z602 305 aa11□□□□□ -0.65
NUP188-205ENST00000477069 PHF6Q8IWS0 365 aaKnown RBP eCLIP11□□□□□ -0.65
NUP188-205ENST00000477069 ADGRF3Q8IZF5 1079 aa11□□□□□ -0.65
NUP188-205ENST00000477069 ZNF555Q8NEP9 628 aa11□□□□□ -0.65
NUP188-205ENST00000477069 OR52N2Q8NGI0 321 aa11□□□□□ -0.65
NUP188-205ENST00000477069 NRBF2Q96F24 287 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms