RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ROPN1LQ96C74 230 aa27.51■■□□□ 1.99
VEGFA-211ENST00000476772 MS4A6EQ96DS6 147 aa27.51■■□□□ 1.99
VEGFA-211ENST00000476772 ZFYVE21Q9BQ24 234 aa27.51■■□□□ 1.99
VEGFA-211ENST00000476772 GOLGA4Q13439 2230 aaKnown RBP27.51■■□□□ 1.99
VEGFA-211ENST00000476772 ARID1BQ8NFD5 2236 aaPredicted RBP27.51■■□□□ 1.99
VEGFA-211ENST00000476772 A0A0G2JN53 185 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 GALR2O43603 387 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-211ENST00000476772 PLA2G16P53816 162 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 C21orf58P58505 322 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 RELAQ04206 551 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 UGT8Q16880 541 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 FAM92BQ6ZTR7 304 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 PAGE2Q7Z2X7 111 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 C16orf78Q8WTQ4 265 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 TRAPPC9Q96Q05 1148 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 C17orf62Q9BQA9 187 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 MMADHCQ9H3L0 296 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-211ENST00000476772 SMOC1Q9H4F8 434 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 IL1RL2Q9HB29 575 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 GMEB2Q9UKD1 530 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 PADI4Q9UM07 663 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 PCDHGA7Q9Y5G6 932 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 R4GN57 208 aa27.5■■□□□ 1.99
VEGFA-211ENST00000476772 A0A088AWK7 358 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 C4orf51C9J302 202 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 CAPN5O15484 640 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-211ENST00000476772 CER1O95813 267 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 GFERP55789 205 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 PSME3P61289 254 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 CCNYL2Q5T2Q4 361 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 FRMPD2BQ6IN97 320 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 NUDT13Q86X67 352 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 ULK2Q8IYT8 1036 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.49■■□□□ 1.992e-10■■■■■ 37.7
VEGFA-211ENST00000476772 THAP11Q96EK4 314 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 MAP3K3Q99759 626 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 SLC39A3Q9BRY0 314 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 SLC6A16Q9GZN6 736 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 CROTQ9UKG9 612 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 IGHV1OR21-1A0A087WYE8 117 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 SH3BP5O60239 455 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 EPN2O95208 641 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 S100A3P33764 101 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 MPLP40238 635 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 PHC1P78364 1004 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 NFYCQ13952 458 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 PGS1Q32NB8 556 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 OR4C11Q6IEV9 310 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 C8orf82Q6P1X6 216 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-211ENST00000476772 SCUBE1Q8IWY4 988 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 EFCAB3Q8N7B9 438 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 C19orf47Q8N9M1 422 aaKnown RBP27.49■■□□□ 1.99
VEGFA-211ENST00000476772 OR7A2PQ8NGA2 310 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 NT5CQ8TCD5 201 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 NCSTNQ92542 709 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 TM4SF19Q96DZ7 209 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 TGM7Q96PF1 710 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 ARRDC1-AS1Q9H2J1 176 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 MYNNQ9NPC7 610 aa27.49■■□□□ 1.99
VEGFA-211ENST00000476772 LOC105369274A0A096LPK9 316 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 LOC102723532A0A0G2JNH3 316 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 SLC9B1P1A6NJY1 282 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 SCAMP2O15127 329 aaKnown RBP27.48■■□□□ 1.99
VEGFA-211ENST00000476772 P2RX6O15547 441 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 ERI3O43414 337 aaKnown RBP27.48■■□□□ 1.99
VEGFA-211ENST00000476772 SYPP08247 313 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 COX7A2P14406 83 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 TAS2R50P59544 299 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 RGS1Q08116 209 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 PWP1Q13610 501 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 NR1D2Q14995 579 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 BNC2Q6ZN30 1099 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-211ENST00000476772 OR4N4Q8N0Y3 316 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 OR2L5Q8NG80 312 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 AHCYL2Q96HN2 611 aaKnown RBP27.48■■□□□ 1.99
VEGFA-211ENST00000476772 QRFPRQ96P65 431 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 TEFMQ96QE5 360 aaKnown RBP27.48■■□□□ 1.99
VEGFA-211ENST00000476772 OR52E6Q96RD3 313 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 FAM60AQ9NP50 221 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 C1GALT1Q9NS00 363 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 GID8Q9NWU2 228 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 ADAM29Q9UKF5 820 aa27.48■■□□□ 1.99
VEGFA-211ENST00000476772 EXO1Q9UQ84 846 aaKnown RBP27.48■■□□□ 1.99
VEGFA-211ENST00000476772 ARHGAP10A1A4S6 786 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 FXYD1O00168 92 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 SIGLEC6O43699 453 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 KIF1CO43896 1103 aaKnown RBP27.47■■□□□ 1.99
VEGFA-211ENST00000476772 SLC35G6P0C7Q6 338 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 HPCAL1P37235 193 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 SSR2P43308 183 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 GPR3P46089 330 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 STXBP1P61764 594 aaKnown RBP27.47■■□□□ 1.99
VEGFA-211ENST00000476772 ABHD17CQ6PCB6 329 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 TMEM132CQ8N3T6 1108 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 DPP10Q8N608 796 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 AMER3Q8N944 861 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 Q8N9G6 341 aaPredicted RBP27.47■■□□□ 1.99
VEGFA-211ENST00000476772 KCT2Q8NC54 265 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 FAM13CQ8NE31 585 aa27.47■■□□□ 1.99
VEGFA-211ENST00000476772 STARD8Q92502 1023 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms