RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.9
USP39-214ENST00000474572 AHSPQ9NZD4 102 aa9.4□□□□□ -0.9
USP39-214ENST00000474572 LMCD1Q9NZU5 365 aa9.4□□□□□ -0.9
USP39-214ENST00000474572 TAC3Q9UHF0 121 aa9.4□□□□□ -0.9
USP39-214ENST00000474572 ADAM29Q9UKF5 820 aa9.4□□□□□ -0.9
USP39-214ENST00000474572 TDRKHQ9Y2W6 561 aaKnown RBP9.4□□□□□ -0.9
USP39-214ENST00000474572 OR1A2Q9Y585 309 aa9.4□□□□□ -0.9
USP39-214ENST00000474572 A0A087WXM4 84 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 SH3BGRLO75368 114 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 EGFP01133 1207 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 ALBP02768 609 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 ACP5P13686 325 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 HOXB2P14652 356 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 GSTM2P28161 218 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 BSGP35613 385 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 LTBRP36941 435 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 RAB28P51157 221 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 CCR8P51685 355 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 ARFIP1P53367 373 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 CRYBA2P53672 197 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 SEC13P55735 322 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 TRA2BP62995 288 aaKnown RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 HBA1P69905 142 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 CSNK1G2P78368 415 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 MRPS21P82921 87 aaKnown RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 EEF1A2Q05639 463 aaKnown RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 C2orf80Q0P641 193 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 FADDQ13158 208 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 TSTA3Q13630 321 aaPredicted RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 TEAD4Q15561 434 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 PRSS53Q2L4Q9 553 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 RFX4Q33E94 735 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 SDE2Q6IQ49 451 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 DUS1LQ6P1R4 473 aaKnown RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 SHQ1Q6PI26 577 aaKnown RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 TTC33Q6PID6 262 aaPredicted RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 ISLR2Q6UXK2 745 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 CCDC80Q76M96 950 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 CHST15Q7LFX5 561 aaPredicted RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 TMEM179BQ7Z7N9 219 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 STK32CQ86UX6 486 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 ZDHHC21Q8IVQ6 265 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 RAB42Q8N4Z0 105 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 OR4A15Q8NGL6 344 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 OR2A1Q8NGT9 310 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 ZFAND2BQ8WV99 257 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 SNX19Q92543 992 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 SDCCAG3Q96C92 435 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 PPCDCQ96CD2 204 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 DGCR14Q96DF8 476 aaKnown RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 NRBF2Q96F24 287 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 C12orf66Q96MD2 445 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 CAMK1GQ96NX5 476 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 NECTIN4Q96NY8 510 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 GRIP2Q9C0E4 1043 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 TMEM38AQ9H6F2 299 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 TM9SF3Q9HD45 589 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 VNN3Q9NY84 501 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 SH3BP4Q9P0V3 963 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 IFT80Q9P2H3 777 aaPredicted RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 TMEFF2Q9UIK5 374 aaPredicted RBP9.39□□□□□ -0.91
USP39-214ENST00000474572 DMTF1Q9Y222 760 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 PDE4DIPQ5VU43 2346 aa9.39□□□□□ -0.91
USP39-214ENST00000474572 TRANK1O15050 2925 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 IGKV1-8A0A0C4DH67 115 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TRBC2A0A5B9 178 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 ANKDD1BA6NHY2 528 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 E9PQ18 207 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 VILLO15195 856 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 CAPN5O15484 640 aaPredicted RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 NOBOXO60393 691 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 CLEC3AO75596 197 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 GCM2O75603 506 aaPredicted RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 OR6B1O95007 311 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 C6orf47O95873 294 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 KLK1P06870 262 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 IL3P08700 152 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 ITGAMP11215 1152 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 ATP6V1B1P15313 513 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 DDCP20711 480 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 DRD1P21728 446 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 PSMB5P28074 263 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 ITGA1P56199 1179 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 TAS2R50P59544 299 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 PPP2CBP62714 309 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 PPP2CAP67775 309 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 MC1RQ01726 317 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 PRDX1Q06830 199 aaKnown RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 SGCGQ13326 291 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 CLCA4Q14CN2 919 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 C16orf72Q14CZ0 275 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 ZIC1Q15915 447 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 UAP1L1Q3KQV9 507 aa9.38□□□□□ -0.91
USP39-214ENST00000474572 LRRC23Q53EV4 343 aaPredicted RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 OTUD3Q5T2D3 398 aaPredicted RBP9.38□□□□□ -0.91
USP39-214ENST00000474572 CCNYL2Q5T2Q4 361 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms