RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PABPN1LA6NDY0 278 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 NPEPPSL1A6NEC2 478 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 TARM1B6A8C7 271 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 PRSS44E7EML9 344 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 CDC7O00311 574 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 PRICKLE3O43900 615 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 SRPX2O60687 465 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 PSIP1O75475 530 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 JRKO75564 520 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 KLHL18O94889 574 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 MATN4O95460 622 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 HPP00738 406 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 CATP04040 527 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ENO2P09104 434 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 MYL2P10916 166 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 CHN1P15882 459 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 TAC1P20366 129 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 SOX11P35716 441 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 SERPINB4P48594 390 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 WDR4P57081 412 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 OR4D1Q15615 310 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 TSNQ15631 228 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 INAQ16352 499 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 FAM214AQ32MH5 1076 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 SP5Q6BEB4 398 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 FIGLAQ6QHK4 219 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ZYG11AQ6WRX3 759 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 SHISA6Q6ZSJ9 500 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 FRA10AC1Q70Z53 315 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 FJX1Q86VR8 437 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 GPSM1Q86YR5 675 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 VRK3Q8IV63 474 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 MGARPQ8TDB4 240 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 SKA2Q8WVK7 121 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 SREK1Q8WXA9 508 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ASB11Q8WXH4 323 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ZUFSPQ96AP4 578 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 CCDC126Q96EE4 140 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 ATOH8Q96SQ7 321 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 RAB11FIP5Q9BXF6 653 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 TRIM54Q9BYV2 358 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 UNKQ9C0B0 810 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 RUBCNLQ9H714 662 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 INTS9Q9NV88 658 aaKnown RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 COPG2Q9UBF2 871 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 RNF112Q9ULX5 631 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 OARD1Q9Y530 152 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 KLF2Q9Y5W3 355 aaPredicted RBP8.62□□□□□ -1.03
SF3A1-206ENST00000471037 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 DOCK10Q96BY6 2186 aa8.62□□□□□ -1.03
SF3A1-206ENST00000471037 DIDO1Q9BTC0 2240 aaKnown RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 IGLV3-12A0A075B6K2 115 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 GFYI3L273 518 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PCDH17O14917 1159 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 BIRC5O15392 142 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 CTSVO60911 334 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 SMIM24O75264 130 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 SBK3P0C264 359 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 CPA3P15088 417 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 ACPPP15309 386 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 GRIA3P42263 894 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 OR1D4P47884 311 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PRKAA2P54646 552 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 AP1S2P56377 157 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 CDKL1Q00532 357 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 KLC1Q07866 573 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 ASPHQ12797 758 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 ART3Q13508 389 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PCLAFQ15004 111 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 SF1Q15637 639 aaKnown RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PPP1R3AQ16821 1122 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 CDKL4Q5MAI5 379 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 ATG9BQ674R7 924 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PRMT9Q6P2P2 845 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 SBSNQ6UWP8 590 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 LINC00696Q6ZRV3 163 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 UBE2R2Q712K3 238 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 TAX1BP1Q86VP1 789 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 SLC22A9Q8IVM8 553 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 SPNS2Q8IVW8 549 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 TRIM42Q8IWZ5 723 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 MCEMP1Q8IX19 187 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 TMEM151AQ8N4L1 468 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 LMNTD1Q8N9Z9 388 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PDPRQ8NCN5 879 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 FBXO15Q8NCQ5 510 aaPredicted RBP8.61□□□□□ -1.03
SF3A1-206ENST00000471037 CATSPER1Q8NEC5 780 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 HMGCLL1Q8TB92 370 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 STT3BQ8TCJ2 826 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 MAGEC3Q8TD91 643 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 MCOLN3Q8TDD5 553 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 DYDC1Q8WWB3 177 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PSMF1Q92530 271 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 NR4A3Q92570 626 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 IL17FQ96PD4 163 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PHF12Q96QT6 1004 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 TAAR6Q96RI8 345 aa8.61□□□□□ -1.03
SF3A1-206ENST00000471037 PAIP2Q9BPZ3 127 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms