RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 NR3C1P04150 777 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 LIPFP07098 398 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 SBK2P0C263 348 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 OR52Z1P0C646 297 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 LINGO3P0C6S8 592 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 UBTFL6P0CB48 400 aaPredicted RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 ACP1P24666 158 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CD27P26842 260 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 LONP1P36776 959 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 NR2C2P49116 596 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 MMP15P51511 669 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 NR0B1P51843 470 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 ADARP55265 1226 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 HILS1P60008 231 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CD81P60033 236 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 GALK2Q01415 458 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CXCL9Q07325 125 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 DOC2AQ14183 400 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 KRT33BQ14525 404 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CEBPEQ15744 281 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CDO1Q16878 200 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CCDC57Q2TAC2 916 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 NADK2Q4G0N4 442 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 TECRLQ5HYJ1 363 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 RNASEH2BQ5TBB1 312 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 ARHGEF16Q5VV41 709 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 ZDHHC20Q5W0Z9 365 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 OR6B2Q6IFH4 312 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 AACSQ86V21 672 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 AMZ2Q86W34 360 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 SERPINA12Q8IW75 414 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 PHC2Q8IXK0 858 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 ZNF679Q8IYX0 411 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 TTC5Q8N0Z6 440 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 WDSUB1Q8N9V3 476 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 OR52E1Q8NGJ3 308 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 ZNF473Q8WTR7 871 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 CHURC1Q8WUH1 139 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 SPSB1Q96BD6 273 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 ATP6V1G3Q96LB4 118 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 C17orf77Q96MU5 243 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 SPATA13Q96N96 652 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 ZNF416Q9BWM5 594 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 TBC1D10AQ9BXI6 508 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CAPS2Q9BXY5 557 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 SLC7A5P2Q9GIP4 190 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 SPATC1LQ9H0A9 340 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 ATG10Q9H0Y0 220 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 RAD21L1Q9H4I0 556 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 MINDY3Q9H8M7 445 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 APOBEC3GQ9HC16 384 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 SLC52A3Q9NQ40 469 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 PRMT7Q9NVM4 692 aaPredicted RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 SMPD3Q9NY59 655 aaPredicted RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 RCC2Q9P258 522 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 THEGQ9P2T0 379 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 DBNLQ9UJU6 430 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 DNPEPQ9ULA0 475 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 CLEC4AQ9UMR7 237 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 STK38LQ9Y2H1 464 aa3.47□□□□□ -1.85
VPS50-209ENST00000467326 WBP11Q9Y2W2 641 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 DHX29Q7Z478 1369 aaKnown RBP3.47□□□□□ -1.85
VPS50-209ENST00000467326 UBE4BO95155 1302 aa3.46□□□□□ -1.85
VPS50-209ENST00000467326 GOLGA6L7A0A1B0GV03 622 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TMEM8BA6NDV4 472 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 C5orf52A6NGY3 159 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 SMIM1B2RUZ4 78 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 E9PI62 339 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TMEM189-UBE2V1I3L0A0 370 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 NDUFS8O00217 210 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 ST8SIA3O43173 380 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 PCDH7O60245 1069 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 CACNG3O60359 315 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 CIDEAO60543 219 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 ZNF821O75541 412 aaPredicted RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 WBP4O75554 376 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 NPPAP01160 153 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TFAP2AP05549 437 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 CALCBP10092 127 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 EPB41P11171 864 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 RALAP11233 206 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 ANXA8P13928 327 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 GNAZP19086 355 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 OTX2P32243 289 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 SERPINB6P35237 376 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 HSD17B2P37059 387 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 NUP62P37198 522 aaPredicted RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 WNT5AP41221 380 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 SERPINH1P50454 418 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 ACTR3P61158 418 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 SPOCK1Q08629 439 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 ACSM1Q08AH1 577 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 PPP1R8Q12972 351 aaKnown RBP3.46□□□□□ -1.86
VPS50-209ENST00000467326 TRDNQ13061 729 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 UBE2V1Q13404 147 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 MEP1AQ16819 746 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 NDUFAF5Q5TEU4 345 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 ANXA8L1Q5VT79 327 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TMEM198Q66K66 360 aa3.46□□□□□ -1.86
VPS50-209ENST00000467326 TMEM211Q6ICI0 200 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms