RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 TMEM71Q6P5X7 295 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 BORAQ6PGQ7 559 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 TMEM184AQ6ZMB5 413 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 KIAA0907Q7Z7F0 614 aaPredicted RBP9.11□□□□□ -0.95
SCAF11-205ENST00000465950 ZNF595Q8IYB9 648 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 DAW1Q8N136 415 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 ATXN10Q9UBB4 475 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 LINC01387J3KSC0 135 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 PORP16435 677 aaPredicted RBP9.11□□□□□ -0.95
SCAF11-205ENST00000465950 ACRV1P26436 265 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 CLRN1P58418 232 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 CTBP1Q13363 440 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 SEMA5AQ13591 1074 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 RFX4Q33E94 735 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 KDELC1Q6UW63 502 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 GPR87Q9BY21 358 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 PARD6BQ9BYG5 372 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 SCN7AQ01118 1682 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 ARGFXA6NJG6 315 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 PIP5K1BO14986 540 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 PCDHGA12O60330 932 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 UGT1A9O60656 530 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 GALR3O60755 368 aaPredicted RBP9.11□□□□□ -0.95
SCAF11-205ENST00000465950 AHCYP23526 432 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 HSD11B1P28845 292 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 HMGCLP35914 325 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 HSPA7P48741 367 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 HADHBP55084 474 aaKnown RBP9.11□□□□□ -0.95
SCAF11-205ENST00000465950 SLC3A1Q07837 685 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 DNASE1L3Q13609 305 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 PWP1Q13610 501 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 IL23RQ5VWK5 629 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 FRG2Q64ET8 278 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 C5orf46Q6UWT4 87 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 SLC15A3Q8IY34 581 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 EME1Q96AY2 570 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 RNFT2Q96EX2 444 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 FRG2BQ96QU4 278 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 TWNKQ96RR1 684 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 CADM1Q9BY67 442 aaKnown RBP9.11□□□□□ -0.95
SCAF11-205ENST00000465950 UGT1A7Q9HAW7 530 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 UGT1A10Q9HAW8 530 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 UGT1A8Q9HAW9 530 aa9.11□□□□□ -0.95
SCAF11-205ENST00000465950 EXOSC4Q9NPD3 245 aaKnown RBP9.11□□□□□ -0.95
SCAF11-205ENST00000465950 OR6C65A6NJZ3 312 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 SMNDC1O75940 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 SLC6A6P31641 620 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 LYPD8Q6UX82 237 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 TP53INP2Q8IXH6 220 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 IL17RCQ8NAC3 791 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 KYQ8NBH2 561 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 GAL3ST3Q96A11 431 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 MVB12AQ96EY5 273 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 COMMD4Q9H0A8 199 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 PCDHGA6Q9Y5G7 932 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 IFNW1P05000 195 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 CSRP1P21291 193 aaKnown RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 PCBD1P61457 104 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 TFF2Q03403 129 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 HSPB3Q12988 150 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 IQCCQ4KMZ1 466 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 LRRC25Q8N386 305 aaPredicted RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 ST13P5Q8NFI4 369 aaPredicted RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 OR4C6Q8NH72 309 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 ELMO3Q96BJ8 720 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 DUSP15Q9H1R2 295 aaPredicted RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 CSNK1G1Q9HCP0 422 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 CLN6Q9NWW5 311 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 GSTK1Q9Y2Q3 226 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 ANXA2P2A6NMY6 339 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 GBE1Q04446 702 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 KLC1Q07866 573 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 RSPO4Q2I0M5 234 aaPredicted RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 TIMM50Q3ZCQ8 353 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 SH3PXD2AQ5TCZ1 1133 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 GPAT4Q86UL3 456 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 PROSER1Q86XN7 944 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 C19orf47Q8N9M1 422 aaKnown RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 PTGFRNQ9P2B2 879 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 CCDC88AQ3V6T2 1871 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 SLC22A3O75751 556 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 HOXD4P09016 255 aaPredicted RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 CEACAM1P13688 526 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 ITGB8P26012 769 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 AIMP2Q13155 320 aaKnown RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 KCNJ8Q15842 424 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 WASHC2DQ5SRD0 308 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 METTL2BQ6P1Q9 378 aaKnown RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 PLD3Q8IV08 490 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 CDC42EP4Q9H3Q1 356 aaKnown RBP9.1□□□□□ -0.95
SCAF11-205ENST00000465950 SEMA6CQ9H3T2 930 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 EBF1Q9UH73 591 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 FADS3Q9Y5Q0 445 aa9.1□□□□□ -0.95
SCAF11-205ENST00000465950 A0A1B0GX78 115 aa9.09□□□□□ -0.95
SCAF11-205ENST00000465950 FUOMA2VDF0 154 aa9.09□□□□□ -0.95
SCAF11-205ENST00000465950 TOX3O15405 576 aaPredicted RBP9.09□□□□□ -0.95
SCAF11-205ENST00000465950 LINC01565O15544 149 aa9.09□□□□□ -0.95
SCAF11-205ENST00000465950 RRP9O43818 475 aaKnown RBP9.09□□□□□ -0.95
SCAF11-205ENST00000465950 TACSTD2P09758 323 aa9.09□□□□□ -0.95
SCAF11-205ENST00000465950 EBLN1P0CF75 366 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms