RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PTGESO14684 152 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 FPGTO14772 594 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 POLR1CO15160 346 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 PCDHGA12O60330 932 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 UGDHO60701 494 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SCN2BO60939 215 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 STK16O75716 305 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 CCNB2O95067 398 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 F2P00734 622 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 HIST1H2AGP0C0S8 130 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SPNP16150 400 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 DPEP1P16444 411 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 HIST1H2ADP20671 130 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ITGALP20701 1170 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 PRDX3P30048 256 aaKnown RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 OR1E1P30953 314 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 HOXA9P31269 272 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 TNFSF8P32971 234 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SDC2P34741 201 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 MAPK8P45983 427 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 OR3A3P47888 321 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 CPT1AP50416 773 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 NKX2-5P52952 324 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 PPP3R1P63098 170 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ST3GAL4Q11206 333 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 FAPQ12884 760 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 PTGR1Q14914 329 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 NCF4Q15080 339 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 GPR33Q49SQ1 333 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 CCDC58Q4VC31 144 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 KLHL12Q53G59 568 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 CARD16Q5EG05 197 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 MS4A13Q5J8X5 152 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 NOMO2Q5JPE7 1267 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 FAM209AQ5JX71 171 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC35F1Q5T1Q4 408 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 HACD4Q5VWC8 232 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 MZT2AQ6P582 158 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 DNAJC14Q6Y2X3 702 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF783Q6ZMS7 281 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 NRARPQ7Z6K4 114 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SNX29P2Q8IUI4 249 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 MSRB3Q8IXL7 192 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF683Q8IZ20 524 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 LINC00471Q8N535 108 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 CELF2-AS1Q8N7Q2 184 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SIDT2Q8NBJ9 832 aaKnown RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 FAM46DQ8NEK8 389 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 OR10G2Q8NGC3 310 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 OR4K2Q8NGD2 314 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 OR8J2Q8NGG1 315 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 OR13C4Q8NGS5 318 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 BTN2A2Q8WVV5 523 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 APH1BQ8WW43 257 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SELENOMQ8WWX9 145 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 KLHL6Q8WZ60 621 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 DNASE1L2Q92874 299 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 HIST1H2AHQ96KK5 128 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 RPL10LQ96L21 214 aaKnown RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SAMD11Q96NU1 681 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 RPRD1AQ96P16 312 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 KLHL5Q96PQ7 755 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 HIST1H2AJQ99878 128 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 H2AFJQ9BTM1 129 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC32A1Q9H598 525 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 NT5DC2Q9H857 520 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 FOLH1BQ9HBA9 442 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ISYNA1Q9NPH2 558 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 THSD1Q9NS62 852 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 EXD2Q9NVH0 621 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 RBPJLQ9UBG7 517 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ZNF282Q9UDV7 671 aaPredicted RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 TEKT2Q9UIF3 430 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 BTNL2Q9UIR0 455 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ZMYM5Q9UJ78 669 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 VPS4AQ9UN37 437 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 ING4Q9UNL4 249 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 RUVBL1Q9Y265 456 aaKnown RBP6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 GSTK1Q9Y2Q3 226 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 NEUROG3Q9Y4Z2 214 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 PCDHGB7Q9Y5F8 929 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 SPO11Q9Y5K1 396 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 PTPRDP23468 1912 aa6.93□□□□□ -1.3
CLSTN1-204ENST00000464286 PLXNA3P51805 1871 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 A0A1W2PQ72 361 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 HYKKA2RU49 373 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 FABP12A6NFH5 140 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TUBAL3A6NHL2 446 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 F8W735 103 aaPredicted RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 H3BQ06 376 aaPredicted RBP6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 LINC01387J3KSC0 135 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 hCG_2039718K7EN88 272 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 TM4SF5O14894 197 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 KPNA5O15131 536 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 BET1O15155 118 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 SLC16A5O15375 505 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 KDELR3O43731 214 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 ICMTO60725 284 aa6.92□□□□□ -1.3
CLSTN1-204ENST00000464286 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms