RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 GTPBP2Q9BX10 602 aaKnown RBP16.06■□□□□ 0.16
NELFCD-201ENST00000460601 ARRDC1-AS1Q9H2J1 176 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 NMRK1Q9NWW6 199 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 PILRAQ9UKJ1 303 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 EXO1Q9UQ84 846 aaKnown RBP16.06■□□□□ 0.16
NELFCD-201ENST00000460601 PCDHGA7Q9Y5G6 932 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 CFAP54Q96N23 3096 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 CFAP73A6NFT4 308 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 CAPN5O15484 640 aaPredicted RBP16.06■□□□□ 0.16
NELFCD-201ENST00000460601 MYO1DO94832 1006 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 PGRP06401 933 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 ACPPP15309 386 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 EFNA1P20827 205 aaPredicted RBP16.06■□□□□ 0.16
NELFCD-201ENST00000460601 CDH3P22223 829 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 HRH2P25021 359 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 MSX2P35548 267 aaPredicted RBP16.06■□□□□ 0.16
NELFCD-201ENST00000460601 RAP1GDS1P52306 607 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 RAB8AP61006 207 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 UGT8Q16880 541 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 PGS1Q32NB8 556 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 AMZ1Q400G9 498 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 DNAL1Q4LDG9 190 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 ZNF793Q6ZN11 406 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 ULK2Q8IYT8 1036 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 AVL9Q8NBF6 648 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 CCDC124Q96CT7 223 aaKnown RBP16.06■□□□□ 0.16
NELFCD-201ENST00000460601 MS4A6EQ96DS6 147 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.06■□□□□ 0.16
NELFCD-201ENST00000460601 ADGRE2Q9UHX3 823 aa16.06■□□□□ 0.16
NELFCD-201ENST00000460601 SLC9B1P1A6NJY1 282 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 FXYD1O00168 92 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 ERI3O43414 337 aaKnown RBP16.05■□□□□ 0.16
NELFCD-201ENST00000460601 NUDT21O43809 227 aaKnown RBP16.05■□□□□ 0.16
NELFCD-201ENST00000460601 C9P02748 559 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 AHRP35869 848 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 TAS2R50P59544 299 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 RPS15AP62244 130 aaKnown RBP16.05■□□□□ 0.16
NELFCD-201ENST00000460601 ZNF763Q0D2J5 394 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
NELFCD-201ENST00000460601 FAM13CQ8NE31 585 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 TTLQ8NG68 377 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 UCK1Q9HA47 277 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 STARD5Q9NSY2 213 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 NLGN3Q9NZ94 848 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 TMEM9Q9P0T7 183 aa16.05■□□□□ 0.16
NELFCD-201ENST00000460601 ARHGAP33O14559 1287 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 SIGLEC6O43699 453 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 TMPRSS11DO60235 418 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 EIF2S1P05198 315 aaKnown RBP16.04■□□□□ 0.16
NELFCD-201ENST00000460601 PIM1P11309 404 aaPredicted RBP16.04■□□□□ 0.16
NELFCD-201ENST00000460601 MPLP40238 635 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 IRX1P78414 480 aaPredicted RBP16.04■□□□□ 0.16
NELFCD-201ENST00000460601 CFHR1Q03591 330 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 OR4F3Q6IEY1 312 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 SLC23A3Q6PIS1 610 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 USP53Q70EK8 1073 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 HPS6Q86YV9 775 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 PGAM4Q8N0Y7 254 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 SHISA5Q8N114 240 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 FAM156AQ8NDB6 213 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.04■□□□□ 0.16
NELFCD-201ENST00000460601 ZUFSPQ96AP4 578 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 METTL2AQ96IZ6 378 aaKnown RBP16.04■□□□□ 0.16
NELFCD-201ENST00000460601 CDRT15Q96T59 188 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 ZBTB18Q99592 522 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 ZFYVE21Q9BQ24 234 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 SLC6A13Q9NSD5 602 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 SLC7A8Q9UHI5 535 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 LY6G6EA0A0G2JKS1 128 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 GABRR3A8MPY1 467 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 BBIP1A8MTZ0 92 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 GLB1P16278 677 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 TOR1AIP1Q5JTV8 583 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 CCNYL2Q5T2Q4 361 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 TRPV3Q8NET8 790 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 OR8K5Q8NH50 307 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 C16orf78Q8WTQ4 265 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 WDR60Q8WVS4 1066 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 OR52E6Q96RD3 313 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 GMPR2Q9P2T1 348 aaKnown RBP16.04■□□□□ 0.16
NELFCD-201ENST00000460601 SLC6A14Q9UN76 642 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 U3KQA8 63 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 CACNA1HO95180 2353 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 SCN3AQ9NY46 2000 aa16.04■□□□□ 0.16
NELFCD-201ENST00000460601 CROCCQ5TZA2 2017 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 IGHV1OR21-1A0A087WYE8 117 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 IGHV5-51A0A0C4DH38 117 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 B4GAT1O43505 415 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 SEMA3DO95025 777 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 IL3P08700 152 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 LAMP1P11279 417 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 COX7A2P14406 83 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 TCN1P20061 433 aaPredicted RBP16.03■□□□□ 0.16
NELFCD-201ENST00000460601 PRPS1L1P21108 318 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 SERPINB1P30740 379 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 HOXD12P35452 270 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 PSME3P61289 254 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 ELF3P78545 371 aaPredicted RBP16.03■□□□□ 0.16
NELFCD-201ENST00000460601 NFYCQ13952 458 aa16.03■□□□□ 0.16
NELFCD-201ENST00000460601 ADPRMQ3LIE5 342 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms