RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SLC6A4P31645 630 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 MECP2P51608 486 aaKnown RBP19.03■□□□□ 0.64
SNX27-204ENST00000458013 RPP38P78345 283 aaKnown RBP19.03■□□□□ 0.64
SNX27-204ENST00000458013 CRHR2Q13324 411 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 TCEANCQ8N8B7 351 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 CCDC107Q8WV48 283 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 FAM210AQ96ND0 272 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 NSUN5Q96P11 429 aaKnown RBP19.03■□□□□ 0.64
SNX27-204ENST00000458013 SLC6A7Q99884 636 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 MYEF2Q9P2K5 600 aaKnown RBP19.03■□□□□ 0.64
SNX27-204ENST00000458013 PCDHB14Q9Y5E9 798 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 HTR1AP08908 422 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 BMP8BP34820 402 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 HCAR3P49019 387 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 BMP8AQ7Z5Y6 402 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 FCGR1BQ92637 280 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 TMEM41AQ96HV5 264 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 SOX1O00570 391 aaPredicted RBP19.03■□□□□ 0.64
SNX27-204ENST00000458013 ABLIM1O14639 778 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 GNSP15586 552 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 AGXTP21549 392 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 NR4A2P43354 598 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 NRIP1P48552 1158 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 RAB11FIP2Q7L804 512 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 FZD3Q9NPG1 666 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 SLC22A1O15245 554 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 EOMESO95936 686 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 ZNF12P17014 697 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 CDH11P55287 796 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 TMEM17Q86X19 198 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 ZNF451Q9Y4E5 1061 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 OR12D1P0DN82 309 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 ANXA8P13928 327 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 STOMP27105 288 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 PCLAFQ15004 111 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 HYAL4Q2M3T9 481 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 GTF2IRD2BQ6EKJ0 949 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 EPGNQ6UW88 154 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 GTF2IRD2Q86UP8 949 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 GALNT12Q8IXK2 581 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 SLAIN1Q8ND83 568 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 OR6N2Q8NGY6 317 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 GATAD2BQ8WXI9 593 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 LRCH3Q96II8 777 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 PEBP4Q96S96 227 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 SH2B3Q9UQQ2 575 aa19.03■□□□□ 0.64
SNX27-204ENST00000458013 CD8B2A6NJW9 211 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 MSL3P1P0C860 447 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 CD8BP10966 210 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 ACADVLP49748 655 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 NFE2L1Q14494 772 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 IFNA21P01568 189 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 NSUN3Q9H649 340 aaKnown RBP19.02■□□□□ 0.64
SNX27-204ENST00000458013 SFTPBP07988 381 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 TYRP14679 529 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 HOXB6P17509 224 aaKnown RBP19.02■□□□□ 0.64
SNX27-204ENST00000458013 TICAM1Q8IUC6 712 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 SLC30A8Q8IWU4 369 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 MSL3Q8N5Y2 521 aaKnown RBP19.02■□□□□ 0.64
SNX27-204ENST00000458013 BORCS8Q96FH0 119 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 AURKBQ96GD4 344 aaPredicted RBP19.02■□□□□ 0.64
SNX27-204ENST00000458013 A0A0G2JLL6 359 aaPredicted RBP19.02■□□□□ 0.64
SNX27-204ENST00000458013 WASHC1A8K0Z3 465 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 GNG2P59768 71 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 SLC25A11Q02978 314 aaKnown RBP19.02■□□□□ 0.64
SNX27-204ENST00000458013 PTCHD3Q3KNS1 767 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 WASH2PQ6VEQ5 465 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 PRRT2Q7Z6L0 340 aaPredicted RBP19.02■□□□□ 0.64
SNX27-204ENST00000458013 CCDC116Q8IYX3 515 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 RDH12Q96NR8 316 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 ABCD2Q9UBJ2 740 aa19.02■□□□□ 0.64
SNX27-204ENST00000458013 CHRNA1P02708 482 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 SLC9A3P48764 834 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 CYBRD1Q53TN4 286 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 TMEM126BQ8IUX1 230 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 OR51G2Q8NGK0 314 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 STOML3Q8TAV4 291 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 SHKBP1Q8TBC3 707 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 HSD3B7Q9H2F3 369 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 TRIM36Q9NQ86 728 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 PCDH10Q9P2E7 1040 aa19.02■□□□□ 0.63
SNX27-204ENST00000458013 SMCO3A2RU48 225 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 KAT7O95251 611 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 NAA10P41227 235 aaPredicted RBP19.01■□□□□ 0.63
SNX27-204ENST00000458013 EEFSECP57772 596 aaKnown RBP19.01■□□□□ 0.63
SNX27-204ENST00000458013 VSX2P58304 361 aaPredicted RBP19.01■□□□□ 0.63
SNX27-204ENST00000458013 CCDC58Q4VC31 144 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 MS4A13Q5J8X5 152 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 PDSS2Q86YH6 399 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 OR5T1Q8NG75 326 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 SDHAF3Q9NRP4 125 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 FAM159BA6NKW6 160 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 ARVCFO00192 962 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 ZNF41P51814 821 aaPredicted RBP19.01■□□□□ 0.63
SNX27-204ENST00000458013 AFF1P51825 1210 aaKnown RBP19.01■□□□□ 0.63
SNX27-204ENST00000458013 MTFR2Q6P444 385 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 ZC3HC1Q86WB0 502 aaKnown RBP19.01■□□□□ 0.63
SNX27-204ENST00000458013 ERI1Q8IV48 349 aaKnown RBP19.01■□□□□ 0.63
SNX27-204ENST00000458013 WDR20Q8TBZ3 569 aa19.01■□□□□ 0.63
SNX27-204ENST00000458013 ENAMQ9NRM1 1142 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms