RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 PCNX1Q96RV3 2341 aa8.2□□□□□ -1.1
RFX3-209ENST00000451859 KCNE1BA0A087WTH5 132 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 TRBC2A0A5B9 178 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 DYTNA2CJ06 578 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 CTAGE15A4D2H0 777 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 ANKUB1A6NFN9 424 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 A8MUI8 341 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 E7ESA3 106 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 PHGDHO43175 533 aaKnown RBP8.19□□□□□ -1.1
RFX3-209ENST00000451859 WDR47O94967 919 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 ENO2P09104 434 aaPredicted RBP8.19□□□□□ -1.1
RFX3-209ENST00000451859 ZNF888P0CJ79 500 aaPredicted RBP8.19□□□□□ -1.1
RFX3-209ENST00000451859 CASQ1P31415 396 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 ZNF33BQ06732 778 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 RGS1Q08116 209 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 RBBP5Q15291 538 aaKnown RBP8.19□□□□□ -1.1
RFX3-209ENST00000451859 TLR1Q15399 786 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 PPP1R3AQ16821 1122 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 BTBD16Q32M84 506 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 DEFB134Q4QY38 66 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 FBXO48Q5FWF7 155 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 CRB2Q5IJ48 1285 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 FCRLBQ6BAA4 426 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 SYT10Q6XYQ8 523 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 CTAGE6Q86UF2 777 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 THOC6Q86W42 341 aaKnown RBP8.19□□□□□ -1.1
RFX3-209ENST00000451859 CTAGE3PQ8IX95 158 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 CCDC116Q8IYX3 515 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 SPATA6LQ8N4H0 392 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 NKAPQ8N5F7 415 aaKnown RBP8.19□□□□□ -1.1
RFX3-209ENST00000451859 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 BBOF1Q8ND07 529 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 SPATA4Q8NEY3 305 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 OR1N1Q8NGS0 311 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 OR56A3Q8NH54 315 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 GRHL3Q8TE85 626 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 SSC4DQ8WTU2 575 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 PSMF1Q92530 271 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 TM4SF19Q96DZ7 209 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 ERP44Q9BS26 406 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.19□□□□□ -1.11e-6■■■■□ 21.8
RFX3-209ENST00000451859 ZNF700Q9H0M5 742 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 RHBGQ9H310 441 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 RHOJQ9H4E5 214 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 PRM3Q9NNZ6 103 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 AGPAT4Q9NRZ5 378 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 TXNDC16Q9P2K2 825 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 RNF14Q9UBS8 474 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 CTNNAL1Q9UBT7 734 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 SLC22A14Q9Y267 594 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 MTO1Q9Y2Z2 717 aaKnown RBP8.19□□□□□ -1.1
RFX3-209ENST00000451859 POLEQ07864 2286 aa8.19□□□□□ -1.1
RFX3-209ENST00000451859 A0A0G2JN53 185 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 CXorf49A8MYA2 514 aaPredicted RBP8.18□□□□□ -1.1
RFX3-209ENST00000451859 NDC80O14777 642 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 B4GALT2O60909 372 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 DNAJB6O75190 326 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 CBX6O95503 412 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 SERPINA7P05543 415 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 GP1BBP13224 206 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 GDF5P43026 501 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 TSFMP43897 325 aaKnown RBP8.18□□□□□ -1.1
RFX3-209ENST00000451859 PLTPP55058 493 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 RAB8AP61006 207 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 ACTN3Q08043 901 aaPredicted RBP8.18□□□□□ -1.1
RFX3-209ENST00000451859 CBLBQ13191 982 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 USP10Q14694 798 aaKnown RBP8.18□□□□□ -1.1
RFX3-209ENST00000451859 ABRAXAS2Q15018 415 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 TOR1AIP1Q5JTV8 583 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 ABHD17BQ5VST6 288 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 TMEM205Q6UW68 189 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 FAM180AQ6UWF9 173 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 IGFL2Q6UWQ7 119 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 MAATS1Q7Z4T9 603 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 CPEB2Q7Z5Q1 589 aaKnown RBP8.18□□□□□ -1.1
RFX3-209ENST00000451859 ANKRD37Q7Z713 158 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 ADAMTSL2Q86TH1 951 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 ABHD11Q8NFV4 315 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 CCT6BQ92526 530 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 TSLPQ969D9 159 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 CYTH2Q99418 400 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 SPOCK3Q9BQ16 436 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 AIF1LQ9BQI0 150 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 NSMCE4AQ9NXX6 385 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 MOCS1Q9NZB8 636 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 WWOXQ9NZC7 414 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 GRHL1Q9NZI5 618 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 WHRNQ9P202 907 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 C19orf25Q9UFG5 118 aaPredicted RBP8.18□□□□□ -1.1
RFX3-209ENST00000451859 ERRFI1Q9UJM3 462 aaPredicted RBP8.18□□□□□ -1.1
RFX3-209ENST00000451859 CENPEQ02224 2701 aa8.18□□□□□ -1.1
RFX3-209ENST00000451859 LOC102723996A0A087X1L8 192 aa8.17□□□□□ -1.1
RFX3-209ENST00000451859 TCRBV9S1A1TA0A576 114 aa8.17□□□□□ -1.1
RFX3-209ENST00000451859 A8MUA0 341 aa8.17□□□□□ -1.1
RFX3-209ENST00000451859 MSTNO14793 375 aa8.17□□□□□ -1.1
RFX3-209ENST00000451859 CLGNO14967 610 aa8.17□□□□□ -1.1
RFX3-209ENST00000451859 CHST10O43529 356 aa8.17□□□□□ -1.1
RFX3-209ENST00000451859 GALR3O60755 368 aaPredicted RBP8.17□□□□□ -1.1
RFX3-209ENST00000451859 FAM155BO75949 473 aa8.17□□□□□ -1.1
RFX3-209ENST00000451859 WDPCPO95876 746 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms