RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SLCO2B1O94956 709 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 ETHE1O95571 254 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 SRCP12931 536 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 ITGA2P17301 1181 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 SPIBQ01892 262 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 RBBP4Q09028 425 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 SPIN4Q56A73 249 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 C1QTNF12Q5T7M4 302 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 KIAA1841Q6NSI8 718 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 CCDC80Q76M96 950 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 OR4A15Q8NGL6 344 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 CCM2Q9BSQ5 444 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 CDCA4Q9BXL8 241 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 CPEB1Q9BZB8 566 aaKnown RBP18.35■□□□□ 0.53
SDCBP-204ENST00000447182 BHLHE41Q9C0J9 482 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-204ENST00000447182 RNF167Q9H6Y7 350 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 BRD9Q9H8M2 597 aa18.35■□□□□ 0.53
SDCBP-204ENST00000447182 PSIP1O75475 530 aaKnown RBP18.34■□□□□ 0.53
SDCBP-204ENST00000447182 SLC10A3P09131 477 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CD70P32970 193 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 EXOC3L2Q2M3D2 409 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 SOWAHCQ53LP3 525 aaPredicted RBP18.34■□□□□ 0.53
SDCBP-204ENST00000447182 HEATR4Q86WZ0 1026 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 SYTL1Q8IYJ3 562 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CPXM2Q8N436 756 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 ATL1Q8WXF7 558 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 ELMO1Q92556 727 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CNOT2Q9NZN8 540 aaKnown RBP18.34■□□□□ 0.53
SDCBP-204ENST00000447182 ALPK3Q96L96 1907 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 SH3D21A4FU49 640 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 MGAT4DA6NG13 374 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 ARHGEF33A8MVX0 844 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 PTPN2P17706 415 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 SOX6P35712 828 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CASP3P42574 277 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 HMGA2P52926 109 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CDH12P55289 794 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 DEFA1P59665 94 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 DEFA3P59666 94 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 TIMM50Q3ZCQ8 353 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 GDPD3Q7L5L3 318 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CCDC190Q86UF4 302 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CHCHD6Q9BRQ6 235 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 EHD1Q9H4M9 534 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 TMEM38AQ9H6F2 299 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 IMPAD1Q9NX62 359 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 MS4A12Q9NXJ0 267 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 ENOPH1Q9UHY7 261 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 ATP6V1HQ9UI12 483 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 LSM7Q9UK45 103 aaKnown RBP18.34■□□□□ 0.53
SDCBP-204ENST00000447182 CFL2Q9Y281 166 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 BRCA2P51587 3418 aa18.34■□□□□ 0.53
SDCBP-204ENST00000447182 EFCAB10A6NFE3 127 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 PRAMEF25A6NGN4 478 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 LOC110117498-PIK3R3F6TDL0 507 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 SGTAO43765 313 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 AP2A2O94973 939 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 ALOX12P18054 663 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 POLR2EP19388 210 aaKnown RBP18.33■□□□□ 0.52
SDCBP-204ENST00000447182 TNFRSF1BP20333 461 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 S100A1P23297 94 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 TIA1P31483 386 aaKnown RBP eCLIP18.33■□□□□ 0.529e-7■■■■□ 24
SDCBP-204ENST00000447182 PIK3CBP42338 1070 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 CRATP43155 626 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 LIMS1P48059 325 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 FCHO2Q0JRZ9 810 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 NDUFA5Q16718 116 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 MPPE1Q53F39 396 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.33■□□□□ 0.52
SDCBP-204ENST00000447182 SPANXN2Q5MJ10 180 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 CCBE1Q6UXH8 406 aaPredicted RBP18.33■□□□□ 0.52
SDCBP-204ENST00000447182 SAPCD2Q86UD0 394 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 B3GNT7Q8NFL0 401 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 OR52J3Q8NH60 311 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 UTP15Q8TED0 518 aaKnown RBP18.33■□□□□ 0.52
SDCBP-204ENST00000447182 PIK3R3Q92569 461 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 Q96MT0 163 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 ZNF556Q9HAH1 456 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 DUSP12Q9UNI6 340 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 EXO1Q9UQ84 846 aaKnown RBP18.33■□□□□ 0.52
SDCBP-204ENST00000447182 CFAP20Q9Y6A4 193 aaKnown RBP18.33■□□□□ 0.52
SDCBP-204ENST00000447182 TET1Q8NFU7 2136 aa18.33■□□□□ 0.52
SDCBP-204ENST00000447182 KMOO15229 486 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 OPN1SWP03999 348 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 ETFAP13804 333 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 CRISP3P54108 245 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 SREBF2Q12772 1141 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 E2F2Q14209 437 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 COX20Q5RI15 118 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 GCNT6Q5T4J0 391 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 TXNDC8Q6A555 127 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 AGTRAPQ6RW13 159 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 CYP4Z2PQ8N1L4 340 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 OR7G3Q8NG95 312 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 OR52N2Q8NGI0 321 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 OR4K3Q96R72 315 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 SLX1AQ9BQ83 275 aa18.32■□□□□ 0.52
SDCBP-204ENST00000447182 TSEN34Q9BSV6 310 aaKnown RBP18.32■□□□□ 0.52
SDCBP-204ENST00000447182 CCDC32Q9BV29 185 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms