RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 GADD45AP24522 165 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 CRATP43155 626 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 GCNT6Q5T4J0 391 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 LYSMD2Q8IV50 215 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 OR52N2Q8NGI0 321 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 C9orf43Q8TAL5 461 aaPredicted RBP20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 TMEM38AQ9H6F2 299 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 REEP4Q9H6H4 257 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 ZNF556Q9HAH1 456 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 KCNE2Q9Y6J6 123 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 ZNF197O14709 1029 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 POLR2EP19388 210 aaKnown RBP20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 SLC19A1P41440 591 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 MVDP53602 400 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 TOR1AIP1Q5JTV8 583 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 PRSS36Q5K4E3 855 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 MED27Q6P2C8 311 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 RAVER1Q8IY67 606 aaKnown RBP20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 SCLYQ96I15 445 aa20.87■□□□□ 0.93
SKIDA1-201ENST00000444772 HLA-EP13747 358 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 GABRB1P18505 474 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 PRKCDQ05655 676 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 ZNF763Q0D2J5 394 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 SF1Q15637 639 aaKnown RBP20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 NLRP8Q86W28 1048 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 STX19Q8N4C7 294 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 OXR1Q8N573 874 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 ZNF513Q8N8E2 541 aaPredicted RBP20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 HPS1Q92902 700 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 SCAMP4Q969E2 229 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 EFHD2Q96C19 240 aaPredicted RBP20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 FOPNLQ96NB1 174 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 FAM32AQ9Y421 112 aaKnown RBP20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 LEFTY2O00292 366 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 AOC2O75106 756 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 ATG13O75143 517 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 INHAP05111 366 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 EIF2S1P05198 315 aaKnown RBP20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 S100A5P33763 92 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 TGFBR1P36897 503 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 SPIBQ01892 262 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 CD300CQ08708 224 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 PNCKQ6P2M8 343 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 HSD11B1LQ7Z5J1 315 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 CCDC103Q8IW40 242 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 LGI4Q8N135 537 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 TMEM184CQ9NVA4 438 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 RAPGEFL1Q9UHV5 662 aa20.86■□□□□ 0.93
SKIDA1-201ENST00000444772 OR2AG2A6NM03 316 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 COQ9O75208 318 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 IMPA1P29218 277 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 RECQLP46063 649 aaPredicted RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 KRR1Q13601 381 aaKnown RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 SCARB2Q14108 478 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 MAPK11Q15759 364 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 LRRC73Q5JTD7 316 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 HENMT1Q5T8I9 393 aaKnown RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 TRIM40Q6P9F5 258 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 Q6ZPB1 254 aaPredicted RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 CHST14Q8NCH0 376 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 EHD1Q9H4M9 534 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 KLK4Q9Y5K2 254 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 FOXE1O00358 373 aaPredicted RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 IDH2P48735 452 aaKnown RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 ANGPTL8Q6UXH0 198 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 DDX53Q86TM3 631 aaKnown RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 GEMIN6Q8WXD5 167 aaKnown RBP20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 HEPHQ9BQS7 1158 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 SLC35A5Q9BS91 424 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 GPATCH2Q9NW75 528 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 IMPAD1Q9NX62 359 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 PCDHGA3Q9Y5H0 932 aa20.85■□□□□ 0.93
SKIDA1-201ENST00000444772 MPZL2O60487 215 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 SLC16A8O95907 504 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 CDH12P55289 794 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 IRF3Q14653 427 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 ZNF630Q2M218 657 aaPredicted RBP20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 SLCO4C1Q6ZQN7 724 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 Q6ZVU0 165 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 BTN2A2Q8WVV5 523 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 VPS35Q96QK1 796 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 PKP4Q99569 1192 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 C6orf62Q9GZU0 229 aaPredicted RBP20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 PRM3Q9NNZ6 103 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 ABCB10Q9NRK6 738 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 ZNF226Q9NYT6 803 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 SLCO3A1Q9UIG8 710 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 ZNF451Q9Y4E5 1061 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 SLC5A10A0PJK1 596 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 SH3D21A4FU49 640 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 PTTG1O95997 202 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 ADORA3P0DMS8 318 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 ETFAP13804 333 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 PRIM2P49643 509 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 HMGA2P52926 109 aa20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 RPS13P62277 151 aaKnown RBP20.84■□□□□ 0.93
SKIDA1-201ENST00000444772 HBA1P69905 142 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms