RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 CPSF2Q9P2I0 782 aaKnown RBP17.14■□□□□ 0.33
HDAC7-213ENST00000440293 ZNF282Q9UDV7 671 aaPredicted RBP17.14■□□□□ 0.33
HDAC7-213ENST00000440293 TBK1Q9UHD2 729 aa17.14■□□□□ 0.33
HDAC7-213ENST00000440293 NXT1Q9UKK6 140 aaKnown RBP17.14■□□□□ 0.33
HDAC7-213ENST00000440293 TMCO1Q9UM00 188 aa17.14■□□□□ 0.33
HDAC7-213ENST00000440293 TNPO3Q9Y5L0 923 aaKnown RBP17.14■□□□□ 0.33
HDAC7-213ENST00000440293 SLC22A7Q9Y694 548 aa17.14■□□□□ 0.33
HDAC7-213ENST00000440293 VSTM2BA6NLU5 285 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 TCP11X1B4DZS4 312 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 NDUFS4O43181 175 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 IGHEP01854 428 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 SERPIND1P05546 499 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 EPB42P16452 691 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 IRF8Q02556 426 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 RGS1Q08116 209 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 LAPTM5Q13571 262 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 DSG2Q14126 1118 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 DOC2AQ14183 400 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 SLBPQ14493 270 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC7-213ENST00000440293 SETDB1Q15047 1291 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 PCBP2Q15366 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC7-213ENST00000440293 HIST2H2ACQ16777 129 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-213ENST00000440293 XKR6Q5GH73 641 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 HIST2H2AA3Q6FI13 130 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 TMIGD1Q6UXZ0 262 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 LCA5Q86VQ0 697 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 TDRPQ86YL5 185 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 RAB43Q86YS6 212 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 ANKRD53Q8N9V6 530 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 Q8NA96 180 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 FDCSPQ8NFU4 85 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 TTLQ8NG68 377 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 NT5CQ8TCD5 201 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 AENQ8WTP8 325 aaKnown RBP17.13■□□□□ 0.33
HDAC7-213ENST00000440293 WDR34Q96EX3 536 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 EFCAB11Q9BUY7 163 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 ANKHQ9HCJ1 492 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 GPR83Q9NYM4 423 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 MRPS2Q9Y399 296 aaKnown RBP17.13■□□□□ 0.33
HDAC7-213ENST00000440293 ASB1Q9Y576 335 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 ANGPTL3Q9Y5C1 460 aa17.13■□□□□ 0.33
HDAC7-213ENST00000440293 URADA6NGE7 173 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 H0YIG0 161 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 PRAMEF4O60810 478 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 SMIM24O75264 130 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 NSA2O95478 260 aaKnown RBP17.12■□□□□ 0.33
HDAC7-213ENST00000440293 TUBBP07437 444 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 CASP2P42575 452 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 PCDH1Q08174 1060 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 CHAF1BQ13112 559 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 CHIT1Q13231 466 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 RASA2Q15283 850 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 TBCCQ15814 346 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 PAGE2BQ5JRK9 111 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 PRAMEF9Q5VWM5 478 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 METTL2BQ6P1Q9 378 aaKnown RBP17.12■□□□□ 0.33
HDAC7-213ENST00000440293 TEX9Q8N6V9 391 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 OR9A4Q8NGU2 314 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 NACC2Q96BF6 587 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 MIEF2Q96C03 454 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 MOCOSQ96EN8 888 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 SEC16BQ96JE7 1060 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 MRPL46Q9H2W6 279 aaKnown RBP17.12■□□□□ 0.33
HDAC7-213ENST00000440293 COPG2Q9UBF2 871 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 TRPC4Q9UBN4 977 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 CTSFQ9UBX1 484 aa17.12■□□□□ 0.33
HDAC7-213ENST00000440293 IGLV3-12A0A075B6K2 115 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 UMODP07911 640 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 SERPINA6P08185 405 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 ZGLP1P0C6A0 271 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 EPORP19235 508 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 GSTM2P28161 218 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 OTX2P32243 289 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 SLCO1A2P46721 670 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 NAA30Q147X3 362 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-213ENST00000440293 HERC3Q15034 1050 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 SLC6A19Q695T7 634 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 NIPAL1Q6NVV3 410 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 IGFL3Q6UXB1 125 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 MAMDC2Q7Z304 686 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-213ENST00000440293 RBMXL3Q8N7X1 1067 aaKnown RBP17.11■□□□□ 0.33
HDAC7-213ENST00000440293 ZCCHC10Q8TBK6 192 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 STT3BQ8TCJ2 826 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 CREB3L4Q8TEY5 395 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 CAVIN3Q969G5 261 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 PHF21BQ96EK2 531 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 SPSB2Q99619 263 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 NUDT9Q9BW91 350 aa17.11■□□□□ 0.33
HDAC7-213ENST00000440293 SOX17Q9H6I2 414 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-213ENST00000440293 MKKSQ9NPJ1 570 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-213ENST00000440293 ZNF490Q9ULM2 529 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-213ENST00000440293 PRRC2CQ9Y520 2896 aaKnown RBP17.11■□□□□ 0.33
HDAC7-213ENST00000440293 MDC1Q14676 2089 aaKnown RBP17.1■□□□□ 0.33
HDAC7-213ENST00000440293 ANKDD1BA6NHY2 528 aa17.1■□□□□ 0.33
HDAC7-213ENST00000440293 SMIM23A6NLE4 172 aa17.1■□□□□ 0.33
HDAC7-213ENST00000440293 GOLGA8RI6L899 631 aa17.1■□□□□ 0.33
HDAC7-213ENST00000440293 PEX12O00623 359 aa17.1■□□□□ 0.33
HDAC7-213ENST00000440293 WFS1O76024 890 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms