RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 C11orf54Q9H0W9 315 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-209ENST00000439886 ARNT2Q9HBZ2 717 aa11.3□□□□□ -0.6
SMPD4-209ENST00000439886 NDRG4Q9ULP0 352 aaKnown RBP11.3□□□□□ -0.6
SMPD4-209ENST00000439886 SLC6A14Q9UN76 642 aa11.3□□□□□ -0.6
SMPD4-209ENST00000439886 PRG3Q9Y2Y8 225 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-209ENST00000439886 NAALAD2Q9Y3Q0 740 aa11.3□□□□□ -0.6
SMPD4-209ENST00000439886 PCDHB9Q9Y5E1 797 aa11.3□□□□□ -0.6
SMPD4-209ENST00000439886 PTCH2Q9Y6C5 1203 aa11.3□□□□□ -0.6
SMPD4-209ENST00000439886 COL1A2P08123 1366 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ESR1P03372 595 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 CD72P21854 359 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 CXCR4P61073 352 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ZNF33AQ06730 810 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 CDH18Q13634 790 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ATG9BQ674R7 924 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 LRRC66Q68CR7 880 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
SMPD4-209ENST00000439886 DNAJC22Q8N4W6 341 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 PGAP3Q96FM1 320 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-209ENST00000439886 HDHD5Q9BXW7 423 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ATG10Q9H0Y0 220 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 DIABLOQ9NR28 239 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ING3Q9NXR8 418 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 FNIP2Q9P278 1114 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 PSORS1C1Q9UIG5 152 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 EDARQ9UNE0 448 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 IRF1P10914 325 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ITGA2P17301 1181 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 SOAT1P35610 550 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 RORCP51449 518 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 CDC42P60953 191 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 IL18Q14116 193 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 VMACQ2NL98 169 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 CHAC2Q8WUX2 184 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ASB15Q8WXK1 588 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 NELL1Q92832 810 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ZNF566Q969W8 418 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 SGK3Q96BR1 496 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 TESCQ96BS2 214 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ZBED3Q96IU2 234 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-209ENST00000439886 CCDC115Q96NT0 180 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 MTERF1Q99551 399 aaKnown RBP11.29□□□□□ -0.6
SMPD4-209ENST00000439886 FAM83DQ9H4H8 585 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 CLN6Q9NWW5 311 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 SPATA2Q9UM82 520 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 SSR3Q9UNL2 185 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ZNF175Q9Y473 711 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
SMPD4-209ENST00000439886 A0A0X1KG70 313 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MAGEB17A8MXT2 336 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MANBAO00462 879 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 SHOXO15266 292 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 CAPN5O15484 640 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PDGFAP04085 211 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PROS1P07225 676 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 SDHBP21912 280 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 RGRP47804 291 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 VEPH1Q14D04 833 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 WSCD2Q2TBF2 565 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 BCDIN3DQ7Z5W3 292 aaKnown RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MDGA1Q8NFP4 955 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 OR6C4Q8NGE1 309 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 APH1BQ8WW43 257 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 BOCQ9BWV1 1114 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 TM6SF2Q9BZW4 377 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 ASB8Q9H765 288 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 NUDT4Q9NZJ9 180 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 CRLS1Q9UJA2 301 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 DIMT1Q9UNQ2 313 aaKnown RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 GRIP1Q9Y3R0 1128 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 GNG14A0A1W2PPG7 69 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 A0A1W2PQL4 384 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 FAM220BPB1ANY3 271 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PLD2O14939 933 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 GPX5O75715 221 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PDYNP01213 254 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 RHOQP17081 205 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 DDOSTP39656 456 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 TAF1CQ15572 869 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 Q3ZCU0 254 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 ZC3H12BQ5HYM0 836 aaKnown RBP11.28□□□□□ -0.6
SMPD4-209ENST00000439886 C22orf42Q6IC83 251 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 OTOP2Q7RTS6 562 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 C12orf57Q99622 126 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MAGIXQ9H6Y5 334 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 TMPRSS11EQ9UL52 423 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 FAM227AF5H4B4 570 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 J3KTA2 159 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 MYL12BO14950 172 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 ALPIP09923 528 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 UGT2B10P36537 528 aa11.28□□□□□ -0.6
SMPD4-209ENST00000439886 PBX3P40426 434 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms