RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 NAA30Q147X3 362 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 RBBP5Q15291 538 aaKnown RBP13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 H3F3CQ6NXT2 135 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 TMPRSS11BQ86T26 416 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 LMNTD2Q8IXW0 634 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 ANKRD53Q8N9V6 530 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 OR56A3Q8NH54 315 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 THAP11Q96EK4 314 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 PTCHD1Q96NR3 888 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 LPAR4Q99677 370 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 TRIM51Q9BSJ1 452 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 NECTIN3Q9NQS3 549 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 PDZD2O15018 2839 aa13.38□□□□□ -0.27
SMARCE1-205ENST00000431889 PABPN1LA6NDY0 278 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 NEURL1O76050 574 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ALOX12P18054 663 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 GDF5P43026 501 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 FNTAP49354 379 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 NR0B1P51843 470 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ALDH6A1Q02252 535 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SP140Q13342 867 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 CSHL1Q14406 222 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 EXT1Q16394 746 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 CAPN12Q6ZSI9 719 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SPATA6LQ8N4H0 392 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 CPSF7Q8N684 471 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 DNAJB8Q8NHS0 232 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 M1APQ8TC57 530 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SLC5A11Q8WWX8 675 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 TBC1D20Q96BZ9 403 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 FRMD6Q96NE9 622 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 AICDAQ9GZX7 198 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 LIN28AQ9H9Z2 209 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 MMP25Q9NPA2 562 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 LRFN1Q9P244 771 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SLC22A14Q9Y267 594 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ADGRG4Q8IZF6 3080 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 OTOGQ6ZRI0 2925 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 MAGEB17A8MXT2 336 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SLC16A5O15375 505 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SP1P08047 785 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 FASTKD3Q14CZ7 662 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 HERC3Q15034 1050 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 TOR1AIP1Q5JTV8 583 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ARMC3Q5W041 872 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 DUPD1Q68J44 220 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 C16orf47Q6ZP98 133 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 THOC6Q86W42 341 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SLC34A3Q8N130 599 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 AFAP1L2Q8N4X5 818 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 PLPP5Q8NEB5 264 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ABHD11Q8NFV4 315 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 OR4K1Q8NGD4 311 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 ADAMTS18Q8TE60 1221 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 UTP15Q8TED0 518 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SCMH1Q96GD3 660 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 MAGED4Q96JG8 741 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 NAP1L3Q99457 506 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 HAUS8Q9BT25 410 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SNX12Q9UMY4 172 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 SLC22A7Q9Y694 548 aa13.37□□□□□ -0.27
SMARCE1-205ENST00000431889 TACC2O95359 2948 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 NCF1BA6NI72 391 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 NCF1CA8MVU1 366 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 NCF1P14598 390 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 CD46P15529 392 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 CCND1P24385 295 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 IVDP26440 423 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 SCTRP47872 440 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 AP2B1P63010 937 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 RBPJQ06330 500 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 GTF3C1Q12789 2109 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 ADNP2Q6IQ32 1131 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 LRRC8EQ6NSJ5 796 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 SBSNQ6UWP8 590 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 ZNF227Q86WZ6 799 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 CNTN4Q8IWV2 1026 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 SLC5A8Q8N695 610 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 ANKRD49Q8WVL7 239 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 FBXL8Q96CD0 374 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 GPR137Q96N19 417 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 EGFL8Q99944 293 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 ITGB1BP2Q9UKP3 347 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 DYRK1BQ9Y463 629 aa13.36□□□□□ -0.27
SMARCE1-205ENST00000431889 CELSR1Q9NYQ6 3014 aa13.35□□□□□ -0.27
SMARCE1-205ENST00000431889 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
SMARCE1-205ENST00000431889 PRMT3O60678 531 aa13.35□□□□□ -0.27
SMARCE1-205ENST00000431889 MYBL2P10244 700 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms