RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MED13Q9UHV7 2174 aa9.28□□□□□ -0.92
HDAC6-207ENST00000430858 MDC1Q14676 2089 aaKnown RBP9.28□□□□□ -0.92
HDAC6-207ENST00000430858 ANKRD12Q6UB98 2062 aa9.28□□□□□ -0.92
HDAC6-207ENST00000430858 TLN1Q9Y490 2541 aaKnown RBP9.28□□□□□ -0.92
HDAC6-207ENST00000430858 ZNF860A6NHJ4 632 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 ANKDD1BA6NHY2 528 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 PYCARD-AS1I3L0S3 204 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 UBXN8O00124 270 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 JRKO75564 520 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 KRT38O76015 456 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 SORBS2O94875 1100 aaKnown RBP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 KLHL2O95198 593 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 ABHD2P08910 425 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 ZNF888P0CJ79 500 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 SMIM10L1P0DMW3 83 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 ICAM2P13598 275 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 JAK1P23458 1154 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 MSH2P43246 934 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 FOXK1P85037 733 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 IRF9Q00978 393 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 KCNC4Q03721 635 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 Q0VFX4 171 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 HYAL2Q12891 473 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 LAPTM5Q13571 262 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 TBCCQ15814 346 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 HIST2H2ACQ16777 129 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 XKR6Q5GH73 641 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 COLEC12Q5KU26 742 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 MFSD4BQ5TF39 518 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 SLC6A19Q695T7 634 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 HIST2H2AA3Q6FI13 130 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 FAAH2Q6GMR7 532 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 JMJD6Q6NYC1 403 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 RIPOR1Q6ZS17 1223 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 TRMT10CQ7L0Y3 403 aaKnown RBP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 KBTBD2Q8IY47 623 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 ZADH2Q8N4Q0 377 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 UBTD2Q8WUN7 234 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 PNPLA2Q96AD5 504 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 TBC1D20Q96BZ9 403 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 PTCD3Q96EY7 689 aaKnown RBP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 PEX11GQ96HA9 241 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 SMIM10Q96HG1 83 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 THOC3Q96J01 351 aaKnown RBP9.27□□□□□ -0.93
HDAC6-207ENST00000430858 MESP1Q9BRJ9 268 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 ZNF700Q9H0M5 742 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 VPS11Q9H270 941 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 EPS8L2Q9H6S3 715 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 SLAMF7Q9NQ25 335 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 OPTCQ9UBM4 332 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 B3GNT3Q9Y2A9 372 aa9.27□□□□□ -0.93
HDAC6-207ENST00000430858 CCDC88CQ9P219 2028 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 A0A088AWK7 358 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 LRIT2A6NDA9 550 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 POC1B-GALNT4F8VUJ3 575 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 K7EPI3 171 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CHST10O43529 356 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 PRAMEF4O60810 478 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CLEC3AO75596 197 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 SERPINA7P05543 415 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 FHP07954 510 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 RHOXF2BP0C7M4 288 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 MTHFD2P13995 350 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 GFAPP14136 432 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 EPORP19235 508 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 ZNF10P21506 573 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-207ENST00000430858 HNF4AP41235 474 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CASP2P42575 452 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 MAGEA12P43365 314 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 EFNA3P52797 238 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 MLLT10P55197 1068 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 RAB8AP61006 207 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 IRF8Q02556 426 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 EEF1A2Q05639 463 aaKnown RBP9.26□□□□□ -0.93
HDAC6-207ENST00000430858 PCDH1Q08174 1060 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CHIT1Q13231 466 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 DOC2AQ14183 400 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 E2F2Q14209 437 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 NAA30Q147X3 362 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-207ENST00000430858 SETDB1Q15047 1291 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 PCOLCEQ15113 449 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CRB2Q5IJ48 1285 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 TOR1AIP1Q5JTV8 583 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 LGSNQ5TDP6 509 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 PRAMEF9Q5VWM5 478 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 METTL2BQ6P1Q9 378 aaKnown RBP9.26□□□□□ -0.93
HDAC6-207ENST00000430858 IGFL2Q6UWQ7 119 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 ISLR2Q6UXK2 745 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CPEB2Q7Z5Q1 589 aaKnown RBP9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CNPY4Q8N129 248 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 EIF1ADQ8N9N8 165 aaKnown RBP9.26□□□□□ -0.93
HDAC6-207ENST00000430858 PLPP5Q8NEB5 264 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 OR5T3Q8NGG3 340 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 UHMK1Q8TAS1 419 aaKnown RBP9.26□□□□□ -0.93
HDAC6-207ENST00000430858 PPP4R1Q8TF05 950 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 CCT6BQ92526 530 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 UBE2E3Q969T4 207 aa9.26□□□□□ -0.93
HDAC6-207ENST00000430858 GAL3ST3Q96A11 431 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms