RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 WRAP53Q9BUR4 548 aaKnown RBP15.98■□□□□ 0.15
RIF1-204ENST00000430328 CADM1Q9BY67 442 aaKnown RBP15.98■□□□□ 0.15
RIF1-204ENST00000430328 ZDHHC4Q9NPG8 344 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 A0A1W2PQ45 241 aaPredicted RBP15.98■□□□□ 0.15
RIF1-204ENST00000430328 A0A1W2PQY0 241 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 CCDC85CA6NKD9 419 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 PRKCIP41743 596 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 PSMD8P48556 350 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 TOB1P50616 345 aaPredicted RBP15.98■□□□□ 0.15
RIF1-204ENST00000430328 PEA15Q15121 130 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 ANKRD54Q6NXT1 300 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 PSD2Q9BQI7 771 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 SLC6A16Q9GZN6 736 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 MTFR1LQ9H019 292 aa15.98■□□□□ 0.15
RIF1-204ENST00000430328 E9PI62 339 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 SNAPINO95295 136 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 C1RP00736 705 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 EN1Q05925 392 aaPredicted RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 SPIN4Q56A73 249 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PYURFQ96I23 114 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 DHDHQ9UQ10 334 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 EFCAB7A8K855 629 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 IRF6O14896 467 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 THBS2P35442 1172 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 CX3CR1P49238 355 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 SMAD3P84022 425 aaKnown RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 CREB3L2Q70SY1 520 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PHF13Q86YI8 300 aaPredicted RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 DRAXINQ8NBI3 349 aaPredicted RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 OR14C36Q8NHC7 312 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 CPXM1Q96SM3 734 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 TRMT61BQ9BVS5 477 aaKnown RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 ZCCHC3Q9NUD5 404 aaKnown RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 KDM5CP41229 1560 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 TRBV23OR9-2A0A075B6M9 112 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 SAP18O00422 153 aaKnown RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 CLDN11O75508 207 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PGM5Q15124 567 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 UNQ6126/PRO20091Q6UXV3 157 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 ZNF662Q6ZS27 426 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 COQ10AQ96MF6 247 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PCDHAC1Q9H158 963 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 KLRF1Q9NZS2 232 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 GHRLQ9UBU3 117 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 RNF13O43567 381 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 SC5DO75845 299 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PCBP1Q15365 356 aaKnown RBP eCLIP15.97■□□□□ 0.15
RIF1-204ENST00000430328 XKR5Q6UX68 686 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PLEKHG7Q6ZR37 379 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PRSS58Q8IYP2 241 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 TMBIM1Q969X1 311 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 ADAM19Q9H013 955 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 MEPEQ9NQ76 525 aaPredicted RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 PCDHGA7Q9Y5G6 932 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 SLC22A10Q63ZE4 541 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 DEDD2Q8WXF8 326 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 SHC3Q92529 594 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 MOB1AQ9H8S9 216 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 MRM3Q9HC36 420 aaKnown RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 MS4A12Q9NXJ0 267 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 NLRP8Q86W28 1048 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 TCEANCQ8N8B7 351 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 OR13C3Q8NGS6 347 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 ZNF641Q96N77 438 aaPredicted RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 ATP7AQ04656 1500 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 GP1BBP13224 206 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 NR0B1P51843 470 aaKnown RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 S100A7AQ86SG5 101 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 PIGZQ86VD9 579 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 OR56A1Q8NGH5 318 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 OR4D6Q8NGJ1 314 aa15.97■□□□□ 0.15
RIF1-204ENST00000430328 CNOT9Q92600 299 aaKnown RBP15.97■□□□□ 0.15
RIF1-204ENST00000430328 ZNF41P51814 821 aaPredicted RBP15.96■□□□□ 0.15
RIF1-204ENST00000430328 NT5DC1Q5TFE4 455 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 ERN2Q76MJ5 926 aaKnown RBP15.96■□□□□ 0.15
RIF1-204ENST00000430328 BTN2A3PQ96KV6 586 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 TEX10Q9NXF1 929 aaPredicted RBP15.96■□□□□ 0.15
RIF1-204ENST00000430328 COL20A1Q9P218 1284 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 A0A1W2PPL8 197 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 RETP07949 1114 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 XRCC1P18887 633 aaPredicted RBP15.96■□□□□ 0.15
RIF1-204ENST00000430328 ADGRD1Q6QNK2 874 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 ZDHHC1Q8WTX9 485 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 NR4A3Q92570 626 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 COQ3Q9NZJ6 369 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 MYH13Q9UKX3 1938 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 FADS1O60427 444 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 RFPL2O75678 378 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 ENGP17813 658 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 RAB6AP20340 208 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 ACTR1AP61163 376 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 CAPSQ13938 189 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 MBOAT1Q6ZNC8 495 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 MAPK15Q8TD08 544 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 ST7LQ8TDW4 575 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 PTERQ96BW5 349 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 DPYSL5Q9BPU6 564 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 OR51I1Q9H343 314 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 ANKRD28O15084 1053 aa15.96■□□□□ 0.15
RIF1-204ENST00000430328 CD6P30203 668 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms