RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 NKAPLQ5M9Q1 402 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 GPRC6AQ5T6X5 926 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 NAT8LQ8N9F0 302 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 TSSK6Q9BXA6 273 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 OR51I1Q9H343 314 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 TRIM36Q9NQ86 728 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 SCO2O43819 266 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 CNTN5O94779 1100 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 CKMT2P17540 419 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 ATF6P18850 670 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 EEFSECP57772 596 aaKnown RBP14.91□□□□□ -0.02
PTPRF-206ENST00000429895 SELENOVP59797 346 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 TPRG1LQ5T0D9 272 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 TMEM225Q6GV28 225 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 ZNF283Q8N7M2 679 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 KCTD13Q8WZ19 329 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 ZNF226Q9NYT6 803 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 KCNS2Q9ULS6 477 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 AHSGP02765 367 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 SRPRAP08240 638 aaKnown RBP14.91□□□□□ -0.02
PTPRF-206ENST00000429895 RBM34P42696 430 aaKnown RBP14.91□□□□□ -0.02
PTPRF-206ENST00000429895 MAGEA2P43356 314 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 C1orf61Q13536 156 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 LAPTM4AQ15012 233 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 AVL9Q8NBF6 648 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 HSH2DQ96JZ2 352 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 ABCD2Q9UBJ2 740 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 CA14Q9ULX7 337 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 ALG5Q9Y673 324 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 G6PDP11413 515 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 GNG2P59768 71 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 HERV-K104P61576 105 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 LACTB2Q53H82 288 aaPredicted RBP14.9□□□□□ -0.02
PTPRF-206ENST00000429895 RAB11FIP2Q7L804 512 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 IL22RA1Q8N6P7 574 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 NIPA2Q8N8Q9 360 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 CANT1Q8WVQ1 401 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 SCGB3A2Q96PL1 93 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 TTYH3Q9C0H2 523 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 SMOC2Q9H3U7 446 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 POU2F3Q9UKI9 436 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 A0A0D9SEW6 157 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 LSM1O15116 133 aaKnown RBP14.9□□□□□ -0.02
PTPRF-206ENST00000429895 SPARCP09486 303 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 HAPLN1P10915 354 aaPredicted RBP14.9□□□□□ -0.02
PTPRF-206ENST00000429895 ITPRIPL2Q3MIP1 535 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 OR2T5Q6IEZ7 315 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 ZBTB8BQ8NAP8 495 aaPredicted RBP14.9□□□□□ -0.02
PTPRF-206ENST00000429895 OR2T29Q8NH02 315 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 RAB8BQ92930 207 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 TMEM74Q96NL1 305 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 ALPK1Q96QP1 1244 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 BCL9LQ86UU0 1499 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 H7BY64 318 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 RAB36O95755 333 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 PCSK2P16519 638 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 DRICH1Q6PGQ1 229 aaPredicted RBP14.9□□□□□ -0.02
PTPRF-206ENST00000429895 DENND1AQ8TEH3 1009 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 PRAP1Q96NZ9 151 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 TGM7Q96PF1 710 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 MAF1Q9H063 256 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 PRTFDC1Q9NRG1 225 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 PCDHGB2Q9Y5G2 931 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 PCDHGA6Q9Y5G7 932 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 TEX13CA0A0J9YWL9 993 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 M0R036 132 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 CPNE6O95741 557 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 NR2C1P13056 603 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 GLP1RP43220 463 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 SGCAQ16586 387 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 HMGN2P46Q86SG4 172 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 NATD1Q8N6N6 113 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 FANK1Q8TC84 345 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 TAMM41Q96BW9 452 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 MSLNLQ96KJ4 702 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 NOP16Q9Y3C1 178 aaKnown RBP14.9□□□□□ -0.02
PTPRF-206ENST00000429895 MTMR11A4FU01 709 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 NPIPA2E9PIF3 369 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 NPIPA3F8WFD2 350 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 FOXN2P32314 431 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 PIK3CBP42338 1070 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 PXYLP1Q8TE99 480 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 SLC22A4Q9H015 551 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 ACTL8Q9H568 366 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 TREM1Q9NP99 234 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 B4GALT6Q9UBX8 382 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 KIDINS220Q9ULH0 1771 aa14.9□□□□□ -0.02
PTPRF-206ENST00000429895 ADAMTS3O15072 1205 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 GALTP07902 379 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 CDH11P55287 796 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 CDK10Q15131 360 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 ELOCQ15369 112 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 NNATQ16517 81 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 DOK4Q8TEW6 326 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 RAB2BQ8WUD1 216 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 FTSJ1Q9UET6 329 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 GPR34Q9UPC5 381 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 M0R2N6 131 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 CDRT1O95170 752 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM115Q12893 351 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms