RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CNIH3Q8TBE1 160 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 DYNC2LI1Q8TCX1 351 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CHTF18Q8WVB6 975 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SLC38A4Q969I6 547 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 REPS1Q96D71 796 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 MTFMTQ96DP5 389 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 APIPQ96GX9 242 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 HRASLS5Q96KN8 279 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 APOLD1Q96LR9 279 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 TSSK3Q96PN8 268 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CLSTN3Q9BQT9 956 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 NEURL2Q9BR09 285 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 HERC2P3Q9BVR0 1158 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ITPAQ9BY32 194 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 TM6SF2Q9BZW4 377 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 REXO4Q9GZR2 422 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SUV39H2Q9H5I1 410 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ACOT13Q9NPJ3 140 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 VPS29Q9UBQ0 182 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF282Q9UDV7 671 aaPredicted RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 PADI2Q9Y2J8 665 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 SAMHD1Q9Y3Z3 626 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 UGT2A1Q9Y4X1 527 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CROCCQ5TZA2 2017 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 CNOT1A5YKK6 2376 aaKnown RBP8.39□□□□□ -1.07
GABPB1-205ENST00000429662 C2orf16Q68DN1 1984 aa8.39□□□□□ -1.07
GABPB1-205ENST00000429662 OR2A25A4D2G3 310 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 C2orf78A6NCI8 922 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 H0YIV9 168 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 K7ERQ8 282 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 PLK4O00444 970 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 GPR39O43194 453 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SUV39H1O43463 412 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SCN2BO60939 215 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CNOT3O75175 753 aaKnown RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 IFNA14P01570 189 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 MT-ND2P03891 347 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 GSNP06396 782 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 PSMB9P28065 219 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 FMO3P31513 532 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 IDUAP35475 653 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CDKN2CP42773 168 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 GATMP50440 423 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 PPP5CP53041 499 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 DCDC1P59894 354 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 RPP38P78345 283 aaKnown RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 OLR1P78380 273 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SLC7A9P82251 487 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 IRF8Q02556 426 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CREMQ03060 361 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 ACSM2AQ08AH3 577 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CDC20Q12834 499 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CHIT1Q13231 466 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SIM2Q14190 667 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 EIF4HQ15056 248 aaKnown RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 PTPRRQ15256 657 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 TBCEQ15813 527 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 INAQ16352 499 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 RSPO4Q2I0M5 234 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 ADPRMQ3LIE5 342 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SPIN4Q56A73 249 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CPTPQ5TA50 214 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 ACSM2BQ68CK6 577 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 OR4F3Q6IEY1 312 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 APCDD1Q8J025 514 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 KIAA1958Q8N8K9 716 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SUMF1Q8NBK3 374 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 C9orf43Q8TAL5 461 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 BCL7CQ8WUZ0 217 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 NUDT8Q8WV74 236 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 ASZ1Q8WWH4 475 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 MRPS31Q92665 395 aaKnown RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 WBP2Q969T9 261 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 TAMM41Q96BW9 452 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 LGALS12Q96DT0 336 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CRELD1Q96HD1 420 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 IGSF21Q96ID5 467 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 DACH2Q96NX9 599 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SIGLEC11Q96RL6 698 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 FAM83CQ9BQN1 747 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 DOHHQ9BU89 302 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 DUSP26Q9BV47 211 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SP140LQ9H930 580 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 CPNE5Q9HCH3 593 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 MRPL17Q9NRX2 175 aaKnown RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SLC6A13Q9NSD5 602 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SPATA6Q9NWH7 488 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SIRT5Q9NXA8 310 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 THUMPD1Q9NXG2 353 aaKnown RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 GPRC5BQ9NZH0 403 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 NFKBIL1Q9UBC1 381 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-205ENST00000429662 OSGIN1Q9UJX0 560 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 UTS2RQ9UKP6 389 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 VPS4AQ9UN37 437 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 HS3ST2Q9Y278 367 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 SH3BP1Q9Y3L3 701 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 DGKBQ9Y6T7 804 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 U3KQV3 271 aa8.38□□□□□ -1.07
GABPB1-205ENST00000429662 COL4A3Q01955 1670 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms