RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 RPS2P15880 293 aaKnown RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 NCK1P16333 377 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 GALP22466 123 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPIBP23284 216 aaKnown RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 DDX6P26196 483 aaKnown RBP eCLIP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 KIR2DL3P43628 341 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 GLRBP48167 497 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 LIMK1P53667 647 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 AP3S2P59780 193 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAP2BP61225 183 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 RNF4P78317 190 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLIN5Q00G26 463 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 IL1RL1Q01638 556 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 DHODHQ02127 395 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ABHD18Q0P651 414 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAP4K2Q12851 820 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF155Q12901 538 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MLLT11Q13015 90 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TDGQ13569 410 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 GK2Q14410 553 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PON3Q15166 354 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MED22Q15528 200 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHRNA6Q15825 494 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC14A2Q15849 920 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF79Q15937 498 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 GRIK4Q16099 956 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM187BQ17R55 369 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 AP5B1Q2VPB7 878 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF792Q3KQV3 632 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPIN4Q56A73 249 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 XKR9Q5GH70 373 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF667Q5HYK9 610 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 NHLRC3Q5JS37 347 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM160B1Q5W0V3 765 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF57Q68EA5 555 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 KIAA0930Q6ICG6 404 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPL13AP3Q6NVV1 102 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 EFCAB12Q6NXP0 572 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 KDELC1Q6UW63 502 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 B3GNT9Q6UX72 402 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 NPNTQ6UXI9 565 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZPBP2Q6X784 338 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 LIPIQ6XZB0 460 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 CATSPERGQ6ZRH7 1159 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM179Q6ZVK1 233 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TRILQ7L0X0 811 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 DET1Q7L5Y6 550 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZDHHC21Q8IVQ6 265 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZFPM1Q8IX07 1006 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MS4A15Q8N5U1 240 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PQLC3Q8N755 202 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF565Q8N9K5 539 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 WDSUB1Q8N9V3 476 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TP53I13Q8NBR0 393 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM163Q8TC26 289 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPR152Q8TDT2 470 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF384Q8TF68 577 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHURC1Q8WUH1 139 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 SFT2D1Q8WV19 159 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TCTEX1D2Q8WW35 142 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ISG20Q96AZ6 181 aaKnown RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM120BQ96EK7 910 aaKnown RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 SCMH1Q96GD3 660 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ATXN7L3BQ96GX2 97 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MCCC1Q96RQ3 725 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM129BQ96TA1 746 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MXRA8Q9BRK3 442 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 H2AFJQ9BTM1 129 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM43Q9BTV4 400 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 THUMPD3Q9BV44 507 aaKnown RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 IFT27Q9BW83 186 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ALOXE3Q9BYJ1 711 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MCOLN1Q9GZU1 580 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 SAP130Q9H0E3 1048 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 LMAN2LQ9H0V9 348 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 MIR1-1HGQ9H1L0 117 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR51J1Q9H342 316 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PIGMQ9H3S5 423 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 GSTO2Q9H4Y5 243 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 XKR8Q9H6D3 395 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPON1Q9HCB6 807 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPN1Q9HCN4 374 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM138Q9NPI0 162 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ITM2CQ9NQX7 267 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 LATS2Q9NRM7 1088 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 HEBP1Q9NRV9 189 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF358Q9NW07 568 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 SIRT5Q9NXA8 310 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 COQ3Q9NZJ6 369 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 CPNE7Q9UBL6 633 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 DPP7Q9UHL4 492 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEFF2Q9UIK5 374 aaPredicted RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 UBQLN1Q9UMX0 589 aaKnown RBP5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 PKP3Q9Y446 797 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 DMRT1Q9Y5R6 373 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 COL18A1P39060 1754 aa5.42□□□□□ -1.54
VTI1BP4-201ENST00000427516 LOC285095A0A1B0GVY8 99 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms