RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 IGF2RP11717 2491 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 URADA6NGE7 173 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 C21orf140B9A014 251 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 FFAR3O14843 346 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 GPR42O15529 346 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 ZNF888P0CJ79 500 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-209ENST00000425836 SMIM10L1P0DMW3 83 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 IL1RNP18510 177 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 SERPINB1P30740 379 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 PKNOX1P55347 436 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 STXBP1P61764 594 aaKnown RBP23.24■■□□□ 1.31
VEGFA-209ENST00000425836 DNASE1L3Q13609 305 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 HERC3Q15034 1050 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 ADPRMQ3LIE5 342 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 FAM219BQ5XKK7 198 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 COX15Q7KZN9 410 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 PDSS2Q86YH6 399 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 RNF175Q8N4F7 328 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 MMABQ96EY8 250 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-209ENST00000425836 SMIM10Q96HG1 83 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 PKNOX2Q96KN3 472 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 CCNL2Q96S94 520 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-209ENST00000425836 ANKHQ9HCJ1 492 aa23.24■■□□□ 1.31
VEGFA-209ENST00000425836 C4orf51C9J302 202 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 EFSO43281 561 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 RAB40ALP0C0E4 278 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 PIM1P11309 404 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 ALOX12P18054 663 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 PIK3CBP42338 1070 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 NEK2P51955 445 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 SLC18A1P54219 525 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 RAB8AP61006 207 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 DDX39BQ13838 428 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MLIPQ5VWP3 458 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 FRG2Q64ET8 278 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 ABHD13Q7L211 337 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 CDYL2Q8N8U2 506 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 ANKRD42Q8N9B4 389 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 AGAP11Q8TF27 550 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 COL26A1Q96A83 441 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MS4A6EQ96DS6 147 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 CNDP1Q96KN2 507 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 FRG2BQ96QU4 278 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MTERF1Q99551 399 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 C17orf62Q9BQA9 187 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MS4A8Q9BY19 250 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 PRM3Q9NNZ6 103 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MID1IP1Q9NPA3 183 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MDC1Q14676 2089 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 DMXL2Q8TDJ6 3036 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 SRRM3A6NNA2 597 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 C9J4A7 227 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 H0YIG0 161 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 NSA2O95478 260 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 ESRRBO95718 433 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 B3GALT4O96024 378 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 TGFB1P01137 390 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 WT1P19544 449 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 AVPR1BP47901 424 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 NCF4Q15080 339 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 ARHGAP40Q5TG30 622 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 TTC19Q6DKK2 380 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MRPL14Q6P1L8 145 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 ZCCHC23Q6ZST2 131 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 OVCH1Q7RTY7 1134 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 NUDCD3Q8IVD9 361 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 GOLGA6L1Q8N7Z2 621 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 AMER3Q8N944 861 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 GAL3ST3Q96A11 431 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MTFMTQ96DP5 389 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 F2RL3Q96RI0 385 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 GPR87Q9BY21 358 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 REXO4Q9GZR2 422 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 MLXIPLQ9NP71 852 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 DMRT3Q9NQL9 472 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 FARSAQ9Y285 508 aaKnown RBP23.23■■□□□ 1.31
VEGFA-209ENST00000425836 NAALAD2Q9Y3Q0 740 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 PCDHGA6Q9Y5G7 932 aa23.23■■□□□ 1.31
VEGFA-209ENST00000425836 WDR91A4D1P6 747 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 SGK494L7N484 410 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 BIRC5O15392 142 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 GALR3O60755 368 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-209ENST00000425836 CNOT3O75175 753 aaKnown RBP23.22■■□□□ 1.31
VEGFA-209ENST00000425836 KLHL18O94889 574 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 DSG2Q14126 1118 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 DEFB134Q4QY38 66 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 ENDOVQ8N8Q3 282 aaKnown RBP23.22■■□□□ 1.31
VEGFA-209ENST00000425836 OR6Y1Q8NGX8 325 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 SREK1Q8WXA9 508 aaKnown RBP23.22■■□□□ 1.31
VEGFA-209ENST00000425836 CMTM7Q96FZ5 175 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 EFHD1Q9BUP0 239 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 GPN3Q9UHW5 284 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-209ENST00000425836 KCND3Q9UK17 655 aa23.22■■□□□ 1.31
VEGFA-209ENST00000425836 MRPS18BQ9Y676 258 aaKnown RBP23.22■■□□□ 1.31
VEGFA-209ENST00000425836 MAGEB17A8MXT2 336 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 FOXE1O00358 373 aaPredicted RBP23.21■■□□□ 1.31
VEGFA-209ENST00000425836 ERI3O43414 337 aaKnown RBP23.21■■□□□ 1.31
VEGFA-209ENST00000425836 NPHS1O60500 1241 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 SH3BGRLO75368 114 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 FBLP22087 321 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms