RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ANKRD52Q8NB46 1076 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 OR4C15Q8NGM1 316 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM121BQ9BXQ6 578 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 DDX47Q9H0S4 455 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PDZD7Q9H5P4 517 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PPCSQ9HAB8 311 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RCOR3Q9P2K3 495 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PHF11Q9UIL8 331 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF223Q9UK11 482 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FBXL3Q9UKT7 428 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FCF1Q9Y324 198 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NFE2L3Q9Y4A8 694 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SSU72P8A0A1W2PR75 194 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SLC16A3O15427 465 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PSTPIP1O43586 416 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 KLKB1P03952 638 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 C8GP07360 202 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 LYNP07948 512 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ADRB3P13945 408 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RHOQP17081 205 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PTPN4P29074 926 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ACSL1P33121 698 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CRATP43155 626 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ESRRGP62508 458 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NOMO3P69849 1222 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SLC35B1P78383 322 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 DPYSQ14117 519 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NOMO1Q15155 1222 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 POMZP3Q6PJE2 187 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ARHGAP36Q6ZRI8 547 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FAM83HQ6ZRV2 1179 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF765Q7L2R6 523 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SNX20Q7Z614 316 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PIGZQ86VD9 579 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CREG2Q8IUH2 290 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 D2HGDHQ8N465 521 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 Q8NFD4 153 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CAVIN3Q969G5 261 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 VOPP1Q96AW1 172 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 BSCL2Q96G97 398 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CMTM3Q96MX0 182 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SH3GL2Q99962 352 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 DDA1Q9BW61 102 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CHID1Q9BWS9 393 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RERGLQ9H628 205 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ERVMER34-1Q9H9K5 563 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FGF21Q9NSA1 209 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PCDHA7Q9UN72 937 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NOVA2Q9UNW9 492 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 IRAK3Q9Y616 596 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SCN5AQ14524 2016 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SSC5DA1L4H1 1573 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 ARID1BQ8NFD5 2236 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 GAPDHSO14556 408 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 XKRYO14609 159 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 GMFGO60234 142 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 SH3BGRLO75368 114 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 ACTL6BO94805 426 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CRYAAP02489 173 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 KRT6AP02538 564 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 ALBP02768 609 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 HRGP04196 525 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 KRT6BP04259 564 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 ENO3P13929 434 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 PTGS1P23219 599 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 RFC1P35251 1148 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 KRT6CP48668 564 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CXCR3P49682 368 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 PLTPP55058 493 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CLLU1OSQ5K130 101 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 ANKRD26P1Q6NSI1 321 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 NDUFAF7Q7L592 441 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 TRAPPC6BQ86SZ2 158 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 DND1Q8IYX4 353 aaKnown RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 FUKQ8N0W3 1084 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 TSPAN14Q8NG11 270 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 STON2Q8WXE9 905 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 HPS1Q92902 700 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 KIAA1191Q96A73 305 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 PIGMQ9H3S5 423 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CD248Q9HCU0 757 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 DIABLOQ9NR28 239 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 METTL5Q9NRN9 209 aaKnown RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 PTPRSQ13332 1948 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 PLXND1Q9Y4D7 1925 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 DOCK8Q8NF50 2099 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 PRAMEF33A0A0G2JMD5 474 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 TOR1AO14656 332 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 OR1F1O43749 312 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CNMDO75829 334 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 IFNA4P05014 189 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 LCKP06239 509 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 GSTM3P21266 225 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 DNAJA1P31689 397 aaKnown RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 HPCAL1P37235 193 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 GPR15P49685 360 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 HK2P52789 917 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 AIF1P55008 147 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 SLC7A9P82251 487 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms