RNA–Protein interactions for RNA: ENST00000421852.5

TMEM41A-203, Transcript of transmembrane protein 41A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM41A, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-203ENST00000421852 SPIBQ01892 262 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 TP53BP2Q13625 1128 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 STARD3Q14849 445 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 SYTL1Q8IYJ3 562 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 CACTIN-AS1Q8N1I8 211 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 MCFD2Q8NI22 146 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 ZNF296Q8WUU4 475 aaPredicted RBP13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 HTRA1Q92743 480 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 GTPBP3Q969Y2 492 aaKnown RBP13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 DOHHQ9BU89 302 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 ITM2CQ9NQX7 267 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 KLHL42Q9P2K6 505 aa13.18□□□□□ -0.3
TMEM41A-203ENST00000421852 GRM6O15303 877 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 RFPL2O75678 378 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SLCO2B1O94956 709 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 C8AP07357 584 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 CTSAP10619 480 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 ZNF8P17098 575 aaPredicted RBP13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 HOXD12P35452 270 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 MVDP53602 400 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 CXCR4P61073 352 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SLC7A9P82251 487 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SP140Q13342 867 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 EXOC3L2Q2M3D2 409 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 MPP7Q5T2T1 576 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TMEM220Q6QAJ8 160 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 OR10G2Q8NGC3 310 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TBC1D20Q96BZ9 403 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 DSN1Q9H410 356 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 NINQ8N4C6 2090 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 PCDH17O14917 1159 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 AIREO43918 545 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 DNAJB5O75953 348 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 CXCL10P02778 98 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 DNTTP04053 509 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 ADRA2AP08913 450 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TYRP14679 529 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 RECQLP46063 649 aaPredicted RBP13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TLE2Q04725 743 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 MPEG1Q2M385 716 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 MSANTD1Q6ZTZ1 278 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 UTS2BQ765I0 119 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 ADIPOR2Q86V24 386 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 GGHQ92820 318 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 HPS1Q92902 700 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 HRASLS5Q96KN8 279 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 CPEB1Q9BZB8 566 aaKnown RBP13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 OR51E2Q9H255 320 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SPG21Q9NZD8 308 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 ERVW-1Q9UQF0 538 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 CAB39Q9Y376 341 aaPredicted RBP13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 OBSL1O75147 1896 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 EIF3FO00303 357 aaPredicted RBP13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 PLK4O00444 970 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 NPC1O15118 1278 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TIMP2P16035 220 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TGM1P22735 817 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 RPS26P62854 115 aaKnown RBP13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 VEZF1Q14119 521 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 TIGD6Q17RP2 521 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 GRHL2Q6ISB3 625 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 RNF130Q86XS8 419 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 PGBD3Q8N328 593 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 CLIP4Q8N3C7 705 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 C11orf65Q8NCR3 313 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 DACH2Q96NX9 599 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SIGLEC11Q96RL6 698 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 PITX2Q99697 317 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SLC35A5Q9BS91 424 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 ITPAQ9BY32 194 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 SPASTQ9UBP0 616 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 GULP1Q9UBP9 304 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 PCDHGB3Q9Y5G1 929 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 HSPE1-MOB4S4R3N1 261 aa13.17□□□□□ -0.3
TMEM41A-203ENST00000421852 A8MU76 341 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 H0YIV9 168 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 K7ESM1 405 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 SLC16A5O15375 505 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 TBX1O43435 398 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 PTHP01270 115 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 SOAT1P35610 550 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 SERPINB10P48595 397 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 SELENOWP63302 87 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 DOC2BQ14184 412 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 LY6G5CQ5SRR4 150 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 LSRQ86X29 649 aaPredicted RBP13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 SLC44A2Q8IWA5 706 aaPredicted RBP13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 LGI4Q8N135 537 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 VPS37AQ8NEZ2 397 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 ZNF480Q8WV37 535 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 CHTF18Q8WVB6 975 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 ACAT2Q9BWD1 397 aa13.16□□□□□ -0.3
TMEM41A-203ENST00000421852 CCDC88CQ9P219 2028 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms