RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CD9P21926 228 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 CBSP35520 551 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 MYBPC3Q14896 1274 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 SKIV2LQ15477 1246 aaKnown RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 RGNQ15493 299 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 PLEKHS1Q5SXH7 462 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 LILRA6Q6PI73 481 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 FAM217AQ8IXS0 508 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 MRPL43Q8N983 215 aaKnown RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 ZFP90Q8TF47 636 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 ARMC5Q96C12 935 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 NIPSNAP1Q9BPW8 284 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 TRNAU1APQ9NX07 287 aaKnown RBP12.82□□□□□ -0.36
MCF2L-213ENST00000421756 ADPRHL2Q9NX46 363 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 GPR83Q9NYM4 423 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 PLEKHM1Q9Y4G2 1056 aa12.82□□□□□ -0.36
MCF2L-213ENST00000421756 FAM220BPB1ANY3 271 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PCDH17O14917 1159 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PCDHGA12O60330 932 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 FGBP02675 491 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 CYP17A1P05093 508 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 NPPBP16860 134 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 CRISP3P54108 245 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 AP1S2P56377 157 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 RAE1P78406 368 aaKnown RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 HENMT1Q5T8I9 393 aaKnown RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 CHPFQ8IZ52 775 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PSMA8Q8TAA3 256 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 XAGE5Q8WWM1 108 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 ARRDC3Q96B67 414 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 ZSCAN5AQ9BUG6 496 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 IL1RAPQ9NPH3 570 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PSME2Q9UL46 239 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 FAM32AQ9Y421 112 aaKnown RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 IGLON5A6NGN9 336 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 SCAMP2O15127 329 aaKnown RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 EFEMP2O95967 443 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 KRT20P35900 424 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 HPCAL1P37235 193 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PRSS53Q2L4Q9 553 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF750Q32MQ0 723 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 MPP7Q5T2T1 576 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 DAPK2Q9UIK4 370 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 TRBV5-3A0A0A0MS03 114 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PIPSLA2A3N6 862 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 OR52A4PA6NMU1 304 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 H3BN98 237 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 ZSCAN9O15535 394 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 DNTTP04053 509 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 BCHEP06276 602 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 IDSP22304 550 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PPM1FP49593 454 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 CLCNKAP51800 687 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 SRSF11Q05519 484 aaKnown RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 EXOC3L2Q2M3D2 409 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 RBM45Q8IUH3 476 aaKnown RBP12.81□□□□□ -0.36
MCF2L-213ENST00000421756 AADATQ8N5Z0 425 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 L3MBTL4Q8NA19 623 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 OTULINQ96BN8 352 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 NUS1Q96E22 293 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 MRGPRX3Q96LB0 322 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 TPK1Q9H3S4 243 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 ABCB10Q9NRK6 738 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 DEC1Q9P2X7 70 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PCDHB11Q9Y5F2 797 aa12.81□□□□□ -0.36
MCF2L-213ENST00000421756 PDZK1P1A8MUH7 402 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 C1orf105O95561 183 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 GSTM1P09488 218 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 MANFP55145 182 aaKnown RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 GSTM4Q03013 218 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 EPS8Q12929 822 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 SCARB2Q14108 478 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 C2orf27AQ580R0 203 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 TTC23LQ6PF05 361 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 HEATR4Q86WZ0 1026 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 SVOPLQ8N434 492 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 ABHD11Q8NFV4 315 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 WDR20Q8TBZ3 569 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 DNASE1L2Q92874 299 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 DTNBP1Q96EV8 351 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 KCNK12Q9HB15 430 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 SCN2BO60939 215 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 LILRB3O75022 631 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 TIMP1P01033 207 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 RETP07949 1114 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 STSP08842 583 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 CD36P16671 472 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 DCKP27707 260 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 DNAJA1P31689 397 aaKnown RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 GPC1P35052 558 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 HIST2H2ACQ16777 129 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF691Q5VV52 312 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 HIST2H2AA3Q6FI13 130 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms