RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PM20D2Q8IYS1 436 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 NEIL3Q8TAT5 605 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 ENOX1Q8TC92 643 aaKnown RBP8.32□□□□□ -1.08
TRIM39-206ENST00000420746 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.32□□□□□ -1.08
TRIM39-206ENST00000420746 PIK3IP1Q96FE7 263 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 CAPZA3Q96KX2 299 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 SFXN3Q9BWM7 321 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 TSSK1BQ9BXA7 367 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 SHARPINQ9H0F6 387 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 EPB41L4BQ9H329 900 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 ACKR4Q9NPB9 350 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 TRMT1Q9NXH9 659 aaKnown RBP8.32□□□□□ -1.08
TRIM39-206ENST00000420746 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 PPIEQ9UNP9 301 aaKnown RBP8.32□□□□□ -1.08
TRIM39-206ENST00000420746 DSCAMO60469 2012 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 CR1P17927 2039 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 TRBV11-1A0A0K0K1C0 115 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 APOL1O14791 398 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 CDC123O75794 336 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 CCNDBP1O95273 360 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 C1orf105O95561 183 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 AGTP01019 485 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 FHP07954 510 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ERGP11308 486 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 KDELR1P24390 212 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 CCR7P32248 378 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 IDUAP35475 653 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 GJC1P36383 396 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 CPA2P48052 419 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 NR2C2P49116 596 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 GEMP55040 296 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 SNRPNP63162 240 aaKnown RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 PRDX1Q06830 199 aaKnown RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 HIST2H2BDQ6DRA6 164 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 RTL4Q6ZR62 310 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 QSOX2Q6ZRP7 698 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 CAND1Q86VP6 1230 aaKnown RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ZNF441Q8N8Z8 693 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 B3GNT7Q8NFL0 401 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 CFAP61Q8NHU2 1237 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 MAGEC3Q8TD91 643 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 TFB1MQ8WVM0 346 aaKnown RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ASB15Q8WXK1 588 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 BTBD6Q96KE9 485 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 SCYL1Q96KG9 808 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 MARK4Q96L34 752 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 SGCZQ96LD1 299 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ZFP3Q96NJ6 502 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ANGPTL4Q9BY76 406 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 PRDM14Q9GZV8 571 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ESRP2Q9H6T0 727 aaKnown RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ZNF703Q9H7S9 590 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 RYDENQ9NUL5 291 aaKnown RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 KLHL8Q9P2G9 620 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 PCYOX1Q9UHG3 505 aa8.31□□□□□ -1.08
TRIM39-206ENST00000420746 FEZ2Q9UHY8 353 aaPredicted RBP8.31□□□□□ -1.08
TRIM39-206ENST00000420746 TCRBV16S1A1N1A0A5B0 115 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 SGK494L7N484 410 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 ANXA9O76027 345 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 APOA4P06727 396 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 PRSS56P0CW18 603 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 SRD5A1P18405 259 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 IL1RNP18510 177 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 ADRA1AP35348 466 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 EEF1A1P68104 462 aaKnown RBP8.3□□□□□ -1.08
TRIM39-206ENST00000420746 SRSF2Q01130 221 aaKnown RBP8.3□□□□□ -1.08
TRIM39-206ENST00000420746 KRT31Q15323 416 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 EEF1A1P5Q5VTE0 462 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 DNM1P46Q6ZS02 220 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 FAM47EQ6ZV65 393 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 PID1Q7Z2X4 250 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 PPHLN1Q8NEY8 458 aaKnown RBP8.3□□□□□ -1.08
TRIM39-206ENST00000420746 SMPDL3AQ92484 453 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 RAPGEF5Q92565 580 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 TBC1D20Q96BZ9 403 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 TRMT61AQ96FX7 289 aaKnown RBP8.3□□□□□ -1.08
TRIM39-206ENST00000420746 VMP1Q96GC9 406 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 PEX11GQ96HA9 241 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 DNAJC1Q96KC8 554 aaKnown RBP8.3□□□□□ -1.08
TRIM39-206ENST00000420746 ERGIC2Q96RQ1 377 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 EBNA1BP2Q99848 306 aaKnown RBP8.3□□□□□ -1.08
TRIM39-206ENST00000420746 ACAT2Q9BWD1 397 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 PIGMQ9H3S5 423 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 CALHM2Q9HA72 323 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 SACM1LQ9NTJ5 587 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 NLE1Q9NVX2 485 aaPredicted RBP8.3□□□□□ -1.08
TRIM39-206ENST00000420746 IMPACTQ9P2X3 320 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 FBXW2Q9UKT8 454 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 TRHDEQ9UKU6 1024 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 ATG4BQ9Y4P1 393 aa8.3□□□□□ -1.08
TRIM39-206ENST00000420746 KCNE1BA0A087WTH5 132 aa8.29□□□□□ -1.08
TRIM39-206ENST00000420746 IGKV3D-11A0A0A0MRZ8 115 aa8.29□□□□□ -1.08
TRIM39-206ENST00000420746 KDM4EB2RXH2 506 aaPredicted RBP8.29□□□□□ -1.08
TRIM39-206ENST00000420746 CCL22O00626 93 aa8.29□□□□□ -1.08
TRIM39-206ENST00000420746 RDH16O75452 317 aa8.29□□□□□ -1.08
TRIM39-206ENST00000420746 OR2J2O76002 312 aa8.29□□□□□ -1.08
TRIM39-206ENST00000420746 ZFAND5O76080 213 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms