RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 SRSF11Q05519 484 aaKnown RBP7.56□□□□□ -1.2
VRK2-203ENST00000417641 SMARCB1Q12824 385 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 VEPH1Q14D04 833 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 PTGES3Q15185 160 aaKnown RBP7.56□□□□□ -1.2
VRK2-203ENST00000417641 GPR19Q15760 415 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CPSF6Q16630 551 aaKnown RBP eCLIP7.56□□□□□ -1.2
VRK2-203ENST00000417641 RNLSQ5VYX0 342 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 PAMR1Q6UXH9 720 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 MBOAT1Q6ZNC8 495 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 ZNF621Q6ZSS3 439 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SLC51BQ86UW2 128 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SCN4BQ8IWT1 228 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 LGI4Q8N135 537 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 THEM5Q8N1Q8 247 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 L3MBTL4Q8NA19 623 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 DUSP18Q8NEJ0 188 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SELENOMQ8WWX9 145 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SLC25A46Q96AG3 418 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 EXOC2Q96KP1 924 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SUSD3Q96L08 255 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 EGFL8Q99944 293 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 BOCQ9BWV1 1114 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 RACGAP1Q9H0H5 632 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 MAGEH1Q9H213 219 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 THSD1Q9NS62 852 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SNTG1Q9NSN8 517 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 STUB1Q9UNE7 303 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 ST3GAL5Q9UNP4 418 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 PRELID1Q9Y255 219 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 DSPPQ9NZW4 1301 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CHD5Q8TDI0 1954 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 LINC00854A0A1B0GVQ3 168 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 F8W810 466 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 FZD6O60353 706 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 TSPAN3O60637 253 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 TPST2O60704 377 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CCNB2O95067 398 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CD160O95971 181 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CSF2P04141 144 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 FHP07954 510 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 HBQ1P09105 142 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 POLR2CP19387 275 aaPredicted RBP7.56□□□□□ -1.2
VRK2-203ENST00000417641 TNFRSF1BP20333 461 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 DGKAP23743 735 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 MAPK1P28482 360 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SOX3P41225 446 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 IL12RB1P42701 662 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 RGS4P49798 205 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 RING1Q06587 406 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 DSC3Q14574 896 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 RGNQ15493 299 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 ZNF628Q5EBL2 1059 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 TMEM201Q5SNT2 666 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 NOXRED1Q6NXP6 359 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CERS6Q6ZMG9 384 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 DPY19L3Q6ZPD9 716 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 TMC8Q8IU68 726 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 C2orf69Q8N8R5 385 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 ZNF557Q8N988 423 aaPredicted RBP7.56□□□□□ -1.2
VRK2-203ENST00000417641 GPRC5AQ8NFJ5 357 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 OR9Q2Q8NGE9 314 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 UTP15Q8TED0 518 aaKnown RBP7.56□□□□□ -1.2
VRK2-203ENST00000417641 HASPINQ8TF76 798 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 APOLD1Q96LR9 279 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 SAMD11Q96NU1 681 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 MAPKAP1Q9BPZ7 522 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CINPQ9BW66 212 aaPredicted RBP7.56□□□□□ -1.2
VRK2-203ENST00000417641 APOL5Q9BWW9 433 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 PRRG3Q9BZD7 231 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 UCK2Q9BZX2 261 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.56□□□□□ -1.2
VRK2-203ENST00000417641 SLC32A1Q9H598 525 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 NARFLQ9H6Q4 476 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 LATS2Q9NRM7 1088 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 ACER3Q9NUN7 267 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 FAM120CQ9NX05 1096 aaKnown RBP7.56□□□□□ -1.2
VRK2-203ENST00000417641 NDUFB11Q9NX14 153 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 NDOR1Q9UHB4 597 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 CLEC2DQ9UHP7 191 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 ALG5Q9Y673 324 aa7.56□□□□□ -1.2
VRK2-203ENST00000417641 TTC3P53804 2025 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 TRBV5-4A0A0C4DH59 114 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 TEX51A0A1B0GUA7 166 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 A0A1W2PQ72 361 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 LINC00862A6NCI5 91 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 PCDH17O14917 1159 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 SLC25A14O95258 325 aaPredicted RBP7.55□□□□□ -1.2
VRK2-203ENST00000417641 CPSF4O95639 269 aaKnown RBP7.55□□□□□ -1.2
VRK2-203ENST00000417641 IL1AP01583 271 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 CLEC2LP0C7M8 214 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 ZNF7P17097 686 aaPredicted RBP7.55□□□□□ -1.2
VRK2-203ENST00000417641 ATF6P18850 670 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 SLC6A4P31645 630 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 CLDN20P56880 219 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 QPRTQ15274 297 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 TATDN3Q17R31 274 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 BTBD16Q32M84 506 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 TRIM60Q495X7 471 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 FLYWCH1Q4VC44 716 aa7.55□□□□□ -1.2
VRK2-203ENST00000417641 CDKL4Q5MAI5 379 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms