RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SLC22A18Q96BI1 424 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 TUBGCP3Q96CW5 907 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 GRIP2Q9C0E4 1043 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 ABCG4Q9H172 646 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 PELI2Q9HAT8 420 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 RAB26Q9ULW5 256 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 PCDHGA11Q9Y5H2 935 aa14.87□□□□□ -0.03
SHMT2-202ENST00000414700 HAT1O14929 419 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 B4GAT1O43505 415 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 PROS1P07225 676 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 ALPPL2P10696 532 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 IDO1P14902 403 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 PPM1FP49593 454 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-202ENST00000414700 GFERP55789 205 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 SLC25A3Q00325 362 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 ZNF425Q6IV72 752 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 PRR23CQ6ZRP0 262 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 TRIM46Q7Z4K8 759 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 LAS2Q8IYD9 372 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 SMYD1Q8NB12 490 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 ACTRT2Q8TDY3 377 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 FAIMQ9NVQ4 179 aa14.86□□□□□ -0.03
SHMT2-202ENST00000414700 IGHV1OR21-1A0A087WYE8 117 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 CPED1A4D0V7 1026 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 CDX4O14627 284 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 LSM1O15116 133 aaKnown RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 TRMUO75648 421 aaKnown RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 TBX6O95947 436 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 STATHP02808 62 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 ALDOCP09972 364 aaKnown RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 CYP4F2P78329 520 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 ABATP80404 500 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 REEP5Q00765 189 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 CFHR1Q03591 330 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 APOFQ13790 326 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 COL9A2Q14055 689 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 AMZ1Q400G9 498 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 PAGE2BQ5JRK9 111 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 PERM1Q5SV97 790 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 KLHL35Q6PF15 583 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 CROCCP3Q8IVE0 287 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 ATOH1Q92858 354 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 CCDC74AQ96AQ1 378 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 SLX1AQ9BQ83 275 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 AIF1LQ9BQI0 150 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 POMT2Q9UKY4 750 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 ENTPD2Q9Y5L3 495 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 H3BNX3 289 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 OR1F1O43749 312 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 DNAJA2O60884 412 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 ZNF806P0C7X5 589 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 SLC5A2P31639 672 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 NR6A1Q15406 480 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 ZIC1Q15915 447 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 FCRL6Q6DN72 434 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 FAM92BQ6ZTR7 304 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 EFL1Q7Z2Z2 1120 aaKnown RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 FAM181AQ8N9Y4 354 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 MAGEB10Q96LZ2 347 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 MACROD1Q9BQ69 325 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 TMEM184CQ9NVA4 438 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 UBAP1Q9NZ09 502 aa14.85□□□□□ -0.03
SHMT2-202ENST00000414700 C6orf203Q9P0P8 240 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-202ENST00000414700 CAPN5O15484 640 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-202ENST00000414700 CTSVO60911 334 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 PDE5AO76074 875 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 PRR35P0CG20 571 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 CD1EP15812 388 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 NCF2P19878 526 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-202ENST00000414700 BCL6P41182 706 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 NR1H2P55055 460 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 RPS13P62277 151 aaKnown RBP14.84□□□□□ -0.03
SHMT2-202ENST00000414700 CYP4F3Q08477 520 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 NR0B2Q15466 257 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 RFTN2Q52LD8 501 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-202ENST00000414700 C6orf136Q5SQH8 315 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 USP53Q70EK8 1073 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 PAQR7Q86WK9 346 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 KRT78Q8N1N4 520 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 SLC45A3Q96JT2 553 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 TGM7Q96PF1 710 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 MAP3K3Q99759 626 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 C1orf50Q9BV19 199 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 TMEM9Q9P0T7 183 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 POMPQ9Y244 141 aa14.84□□□□□ -0.03
SHMT2-202ENST00000414700 OR2A25A4D2G3 310 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 MAGEB3O15480 346 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 HCRTR1O43613 425 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 CCNDBP1O95273 360 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 TGFB1P01137 390 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 ST6GAL1P15907 406 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 PCSK6P29122 969 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 CSF2RBP32927 897 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 LAPTM5Q13571 262 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 NR1D2Q14995 579 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 HIST2H2ACQ16777 129 aaPredicted RBP14.83□□□□□ -0.03
SHMT2-202ENST00000414700 HIST2H2AA3Q6FI13 130 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 ARMC6Q6NXE6 501 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 FIGLAQ6QHK4 219 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 RNF165Q6ZSG1 346 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms