RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZNF449Q6P9G9 518 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CNSTQ6PJW8 725 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 WASH2PQ6VEQ5 465 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 RNF44Q7L0R7 432 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PCGF5Q86SE9 256 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SDCCAG8Q86SQ7 713 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 TMEM135Q86UB9 458 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 TRIM73Q86UV7 250 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 HOOK3Q86VS8 718 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 KCNMB4Q86W47 210 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CCDC25Q86WR0 208 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ZFAND4Q86XD8 727 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PLXDC1Q8IUK5 500 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ZBED8Q8IZ13 594 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 C2orf73Q8N5S3 287 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 ANKRD53Q8N9V6 530 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SIDT2Q8NBJ9 832 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 FBXO36Q8NEA4 188 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 IL17RDQ8NFM7 739 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 OR4D9Q8NGE8 314 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 OR52E1Q8NGJ3 308 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 OR5M3Q8NGP4 307 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 LPGAT1Q92604 370 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 TFGQ92734 400 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 SLCO2A1Q92959 643 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PEX13Q92968 403 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ART4Q93070 314 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 MUL1Q969V5 352 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 TMEM159Q96B96 161 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SNX22Q96L94 193 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 RUNDC3BQ96NL0 473 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SLC46A1Q96NT5 459 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 BIRC8Q96P09 236 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 IL17FQ96PD4 163 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 NDNQ99608 321 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CMKLR1Q99788 373 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 EBNA1BP2Q99848 306 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 ERP44Q9BS26 406 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CARD6Q9BX69 1037 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 OR10A2Q9H208 303 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 P2RY12Q9H244 342 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PLAC1Q9HBJ0 212 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 GCM1Q9NP62 436 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 WASH6PQ9NQA3 447 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SERHLQ9NQF3 203 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 HRASLS2Q9NWW9 162 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 RNF14Q9UBS8 474 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ZNF69Q9UC07 566 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SLC24A2Q9UI40 661 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 GNPTGQ9UJJ9 305 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SLC39A10Q9ULF5 831 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ICKQ9UPZ9 632 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CDYLQ9Y232 598 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ASF1AQ9Y294 204 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 NFS1Q9Y697 457 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PMF1-BGLAPU3KQ54 211 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CCDC88CQ9P219 2028 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 BAHCC1Q9P281 2608 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 UNC79Q9P2D8 2635 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 MN1Q10571 1320 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 LOC400499M0QZD8 3231 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 URB1O60287 2271 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 FER1L5A0AVI2 2057 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 MDC1Q14676 2089 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 IGHV5-51A0A0C4DH38 117 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 C17orf113A0A1B0GUU1 675 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 MAGEB16A2A368 324 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 CDRT15L2A8MXV6 281 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 E5RI56 91 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 TMX2-CTNND1H3BSU7 103 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 QSOX1O00391 747 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 KLK10O43240 276 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 HAUS5O94927 633 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ABHD16AO95870 558 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 C9P02748 559 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 PLA2G1BP04054 148 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 APOA4P06727 396 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ANXA2P07355 339 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 ITGA2BP08514 1039 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 EBLN1P0CF75 366 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ZNF888P0CJ79 500 aaPredicted RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 TPBGLP0DKB5 382 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 RAP2AP10114 183 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 PKMP14618 531 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 PVRP15151 417 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 OGNP20774 298 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 SAT1P21673 171 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 CDH3P22223 829 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 RPS3P23396 243 aaKnown RBP eCLIP4.7□□□□□ -1.66
VPS41-205ENST00000414632 ACADLP28330 430 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 PPARGP37231 505 aaPredicted RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 KPNA2P52292 529 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 RRADP55042 308 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 PLTPP55058 493 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 ARL4CP56559 192 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 CKAP4Q07065 602 aaKnown RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 GALNT1Q10472 559 aaPredicted RBP4.7□□□□□ -1.66
VPS41-205ENST00000414632 CALCOCO2Q13137 446 aa4.7□□□□□ -1.66
VPS41-205ENST00000414632 RPA4Q13156 261 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms