RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 GP1BAP07359 652 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 GPR89BP0CG08 455 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 BCKDHAP12694 445 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 GSK3BP49841 420 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 KLC1Q07866 573 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 INPP5AQ14642 412 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 IGFBP7Q16270 282 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 SGO1Q5FBB7 561 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 PRAMEF9Q5VWM5 478 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 LPCAT4Q643R3 524 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 SLC2A7Q6PXP3 512 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 DLEU7Q6UYE1 221 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 IQCHQ86VS3 1027 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 OR14C36Q8NHC7 312 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 N4BP2L2Q92802 583 aaPredicted RBP16.43■□□□□ 0.22
PTPRC-206ENST00000413409 NR1H4Q96RI1 486 aaPredicted RBP16.43■□□□□ 0.22
PTPRC-206ENST00000413409 ABCG4Q9H172 646 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 ALG2Q9H553 416 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 FAM8A1Q9UBU6 413 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 ZNHIT2Q9UHR6 403 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 AP4S1Q9Y587 144 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 CENPEQ02224 2701 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 CASC3O15234 703 aaKnown RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 NOBOXO60393 691 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 PRMT3O60678 531 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 ITGB2P05107 769 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 ZNF8P17098 575 aaPredicted RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 HTR1EP28566 365 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 DUSP3P51452 185 aaPredicted RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 CLDN8P56748 225 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 MRPS35P82673 323 aaKnown RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 LIPEQ05469 1076 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 NAE1Q13564 534 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 BLMHQ13867 455 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 PTGR1Q14914 329 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 GRAMD1BQ3KR37 738 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 SFT2D3Q587I9 215 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 PNCKQ6P2M8 343 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 SUSD1Q6UWL2 747 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 USP53Q70EK8 1073 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 ZNF547Q8IVP9 402 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 LILRA2Q8N149 483 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 TMEM102Q8N9M5 508 aaPredicted RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 WDR20Q8TBZ3 569 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 FAM131CQ96AQ9 280 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 WDR34Q96EX3 536 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 CGREF1Q99674 301 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 PKP2Q99959 881 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 KCTD14Q9BQ13 255 aaPredicted RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 COPS7BQ9H9Q2 264 aaPredicted RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 BRF2Q9HAW0 419 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 INTS7Q9NVH2 962 aaKnown RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 ARMC1Q9NVT9 282 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 CNOT11Q9UKZ1 510 aaKnown RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 DNMT3AQ9Y6K1 912 aaPredicted RBP16.42■□□□□ 0.22
PTPRC-206ENST00000413409 ICE1Q9Y2F5 2266 aa16.42■□□□□ 0.22
PTPRC-206ENST00000413409 TDRD6O60522 2096 aaKnown RBP16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3DA0A087WVF3 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3IA0A087WXS9 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3EA0A087X179 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3KA0A087X1G2 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3FA6NER0 549 aaPredicted RBP16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3LB9A6J9 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 E7EQ34 232 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 ARPC2O15144 300 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 POP7O75817 140 aaKnown RBP16.41■□□□□ 0.22
PTPRC-206ENST00000413409 KCNH1O95259 989 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 SLC16A8O95907 504 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 GPIP06744 558 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3HP0C7X1 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 PDHA2P29803 388 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 MAT2AP31153 395 aaKnown RBP16.41■□□□□ 0.22
PTPRC-206ENST00000413409 HSPA13P48723 471 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 C21orf58P58505 322 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TAS2R38P59533 333 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 SFSWAPQ12872 951 aaKnown RBP16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TGIF1Q15583 401 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 CCSMST1Q4G0I0 132 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 XKR6Q5GH73 641 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3GQ6DHY5 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3CQ6IPX1 549 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 CAPN13Q6MZZ7 669 aaPredicted RBP16.41■□□□□ 0.22
PTPRC-206ENST00000413409 NANOGP8Q6NSW7 305 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 C11orf96Q7Z7L8 435 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 HEATR4Q86WZ0 1026 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 CFAP206Q8IYR0 622 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TBC1D3Q8IZP1 549 aaPredicted RBP16.41■□□□□ 0.22
PTPRC-206ENST00000413409 OR9A1PQ8NGU1 263 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 TESCQ96BS2 214 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 OR4K3Q96R72 315 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 SGPP1Q9BX95 441 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 VCXQ9H320 206 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 NANOGQ9H9S0 305 aa16.41■□□□□ 0.22
PTPRC-206ENST00000413409 LRBAP50851 2863 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 KRT87PA6NCN2 255 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 TNFSF15O95150 251 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 PGRP06401 933 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 AMD1P17707 334 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 CD22P20273 847 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 ACADLP28330 430 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms