RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PGRP06401 933 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 KLK1P06870 262 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 SYPP08247 313 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 KRT16P08779 473 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 SLC35G6P0C7Q6 338 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MYF5P13349 255 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 ENGP17813 658 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PRPS1L1P21108 318 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 CDH3P22223 829 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TPP2P29144 1249 aaPredicted RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 CSF2RBP32927 897 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 BSGP35613 385 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 HPCAL1P37235 193 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 SSR2P43308 183 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TSFMP43897 325 aaKnown RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 GPR3P46089 330 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 ASMTP46597 345 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 DGKQP52824 942 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 ARFIP1P53367 373 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 EMP3P54852 163 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 OR1D5P58170 312 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 STXBP1P61764 594 aaKnown RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 GPLD1P80108 840 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PWP1Q13610 501 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TLR1Q15399 786 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 NR0B2Q15466 257 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 CCDC6Q16204 474 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 UGT8Q16880 541 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 DPY19L1Q2PZI1 675 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 HKDC1Q2TB90 917 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 FAM174BQ3ZCQ3 159 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MMEL1Q495T6 779 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TOR1AIP1Q5JTV8 583 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 SPANXN4Q5MJ08 99 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 NKAIN2Q5VXU1 208 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 FRMPD2BQ6IN97 320 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TCEAL6Q6IPX3 200 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 C8orf82Q6P1X6 216 aaPredicted RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 FBXO42Q6P3S6 717 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 C16orf89Q6UX73 402 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 HACD2Q6Y1H2 254 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 RIPOR1Q6ZS17 1223 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 FAM92BQ6ZTR7 304 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 IKBIPQ70UQ0 350 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PAGE2Q7Z2X7 111 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 CAMKMTQ7Z624 323 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 SPRED1Q7Z699 444 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 DEFB107AQ8IZN7 70 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 DSELQ8IZU8 1212 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PGAM4Q8N0Y7 254 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 FAM181AQ8N9Y4 354 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PCYOX1LQ8NBM8 494 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 OR2L5Q8NG80 312 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 CDC26Q8NHZ8 85 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS41-204ENST00000413141 NUDT8Q8WV74 236 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 STARD8Q92502 1023 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TCEAL3Q969E4 200 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 GFM2Q969S9 779 aaKnown RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 MARVELD3Q96A59 401 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 CCDC74AQ96AQ1 378 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MCUR1Q96AQ8 359 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 RGMAQ96B86 450 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 ROPN1LQ96C74 230 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MS4A6EQ96DS6 147 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TM4SF19Q96DZ7 209 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 QRFPRQ96P65 431 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TRAPPC9Q96Q05 1148 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TEFMQ96QE5 360 aaKnown RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 RAB3IPQ96QF0 476 aaPredicted RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 CD180Q99467 661 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MAP3K3Q99759 626 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MACROD1Q9BQ69 325 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 C17orf62Q9BQA9 187 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 GTPBP2Q9BX10 602 aaKnown RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 ARRDC1-AS1Q9H2J1 176 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MMADHCQ9H3L0 296 aaPredicted RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 KLHL31Q9H511 634 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 WDR41Q9HAD4 459 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 EFCAB1Q9HAE3 211 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MYNNQ9NPC7 610 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 C1GALT1Q9NS00 363 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 AHSPQ9NZD4 102 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 EPHA6Q9UF33 1036 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 LEF1Q9UJU2 399 aaPredicted RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 GMEB2Q9UKD1 530 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 ADAM29Q9UKF5 820 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PADI4Q9UM07 663 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 NDUFAF1Q9Y375 327 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 ADAMTS9Q9P2N4 1935 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MYO15AQ9UKN7 3530 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 ADAMTS20P59510 1910 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 LOC105369274A0A096LPK9 316 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 LOC102723532A0A0G2JNH3 316 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 LNP1A1A4G5 178 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 ARHGAP10A1A4S6 786 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 SLC9B1P1A6NJY1 282 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 H0YGG7 62 aa6.33□□□□□ -1.4
VPS41-204ENST00000413141 KHNYNO15037 678 aaKnown RBP6.33□□□□□ -1.4
VPS41-204ENST00000413141 ERI3O43414 337 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms