RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CETN2P41208 172 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 AMTP48728 403 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 NUCB2P80303 420 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 MYBPHQ13203 477 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 EFTUD2Q15029 972 aaKnown RBP eCLIP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 RBBP7Q16576 425 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 CTF1Q16619 201 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 ADPRMQ3LIE5 342 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 C1orf185Q5T7R7 199 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 TYW3Q6IPR3 259 aaKnown RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 ANKRD33Q7Z3H0 272 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 TECPR1Q7Z6L1 1165 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 LONP2Q86WA8 852 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 LRRC17Q8N6Y2 441 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 SMYD1Q8NB12 490 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 OR4K1Q8NGD4 311 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 OR8J1Q8NGP2 316 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 U2AF1L4Q8WU68 220 aaKnown RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 DAZLQ92904 295 aaKnown RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 ULK4Q96C45 1275 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 HMCESQ96FZ2 354 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 PIWIL1Q96J94 861 aaKnown RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 WDR76Q9H967 626 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 FAM114A2Q9NRY5 505 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 FAM207AQ9NSI2 230 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 HIF1ANQ9NWT6 349 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 RAB20Q9NX57 234 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 VPS54Q9P1Q0 977 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 PSORS1C1Q9UIG5 152 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 CFAP45Q9UL16 551 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 PSME2Q9UL46 239 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 SPIN1Q9Y657 262 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 PCDH11YQ9BZA8 1340 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 EVPLQ92817 2033 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 A0A1B0GVT2 93 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 A0A1W2PP11 408 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 A8MUI8 341 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 INAFM1C9JVW0 142 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 NPIPA3F8WFD2 350 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 EEF2KO00418 725 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 CACNG3O60359 315 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 GPR137BO60478 399 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 B4GALT2O60909 372 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 LDB3O75112 727 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 KDM4BO94953 1096 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 BAG3O95817 575 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 SERPINA3P01011 423 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 CA3P07451 260 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 YES1P07947 543 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 SFTPBP07988 381 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 CETPP11597 493 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 GOT1P17174 413 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 ALDH4A1P30038 563 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 PRDX2P32119 198 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 DLSTP36957 453 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 SLC1A3P43003 542 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 NR4A2P43354 598 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 NKX2-1P43699 371 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 SLC1A6P48664 564 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 NR2C2P49116 596 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 ATP5IP56385 69 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 CACNG1Q06432 222 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 STX1AQ16623 288 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 CA9Q16790 459 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 CCDC57Q2TAC2 916 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 ANKRD55Q3KP44 614 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 IL23RQ5VWK5 629 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 KLC3Q6P597 504 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 METAP1DQ6UB28 335 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 FAM159AQ6UWV7 190 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 MAP7D3Q8IWC1 876 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 TDHQ8IZJ6 230 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 GCNT2Q8N0V5 402 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 BBOF1Q8ND07 529 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 OR52I2Q8NH67 350 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 OR5R1Q8NH85 324 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 UBTD2Q8WUN7 234 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 PHF21BQ96EK2 531 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 TXNDC15Q96J42 360 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 C4orf36Q96KX1 117 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 MTERF1Q99551 399 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 PRMT1Q99873 361 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 SF3B5Q9BWJ5 86 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 SLC29A3Q9BZD2 475 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 DCLK3Q9C098 648 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 NACA2Q9H009 215 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 THAP2Q9H0W7 228 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 ZDHHC6Q9H6R6 413 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 RPAP3Q9H6T3 665 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 Q9H8V8 135 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 UPF2Q9HAU5 1272 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 RPRD1BQ9NQG5 326 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 GKN1Q9NS71 199 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 HYPKQ9NX55 129 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 RDH8Q9NYR8 311 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 KLHL9Q9P2J3 617 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 INSL5Q9Y5Q6 135 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 PTGDR2Q9Y5Y4 395 aa4.19□□□□□ -1.74
BRCA1-204ENST00000412061 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 KIF16BQ96L93 1317 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms