RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 DUTP33316 252 aaKnown RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 PAX9P55771 341 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 FKBP1BP68106 108 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 GUCY2DQ02846 1103 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 SRSF9Q13242 221 aaKnown RBP eCLIP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 TSTA3Q13630 321 aaPredicted RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 HNRNPDQ14103 355 aaKnown RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 GRB14Q14449 540 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 EFTUD2Q15029 972 aaKnown RBP eCLIP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 EXT1Q16394 746 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 CCDC92Q53HC0 331 aaPredicted RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 ATP1A1-AS1Q5TC04 95 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 TCEAL6Q6IPX3 200 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 SLC27A4Q6P1M0 643 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 SLC25A47Q6Q0C1 308 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 FIP1L1Q6UN15 594 aaKnown RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 CD164L2Q6UWJ8 174 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 B3GLCTQ6Y288 498 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 SIGLEC15Q6ZMC9 328 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 BHLHA9Q7RTU4 235 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 TRMT11Q7Z4G4 463 aaKnown RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 HOGA1Q86XE5 327 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 LACC1Q8IV20 430 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 ELMOD1Q8N336 334 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 DDHD1Q8NEL9 900 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 GANCQ8TET4 914 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 SEPT8Q92599 483 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 F2RL3Q96RI0 385 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 NAP1L3Q99457 506 aaPredicted RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 DDX50Q9BQ39 737 aaKnown RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 FSD1Q9BTV5 496 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 TSPYL1Q9H0U9 437 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 VIPAS39Q9H9C1 493 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 PRMT8Q9NR22 394 aaPredicted RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 PNPLA3Q9NST1 481 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 MIS18AQ9NYP9 233 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 DBF4Q9UBU7 674 aaPredicted RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 IL19Q9UHD0 177 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 TEKT2Q9UIF3 430 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 APPL1Q9UKG1 709 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 SATB2Q9UPW6 733 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 ERVK-19Q9WJR5 959 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 KCNK6Q9Y257 313 aa3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 TDRKHQ9Y2W6 561 aaKnown RBP3.55□□□□□ -1.84
C1GALT1-202ENST00000402468 ABCC9O60706 1549 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 TRBV2A0A0J9YWF9 115 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 BICDL2A1A5D9 508 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 NME6O75414 186 aaPredicted RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 KHDRBS3O75525 346 aaKnown RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 UMODP07911 640 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 HLA-FP30511 346 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 SRD5A2P31213 254 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 TSFMP43897 325 aaKnown RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 OR3A2P47893 321 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 SP3Q02447 781 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 GFPT1Q06210 699 aaPredicted RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 CDH18Q13634 790 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 LASP1Q14847 261 aaKnown RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 TMEM132DQ14C87 1099 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 TAB1Q15750 504 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 C9orf50Q5SZB4 431 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 WLSQ5T9L3 541 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 OR4C11Q6IEV9 310 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 PLBD1Q6P4A8 553 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 RFPL4BQ6ZWI9 263 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 ASPGQ86U10 573 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 ZNF410Q86VK4 478 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 CNTN4Q8IWV2 1026 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 TRIM58Q8NG06 486 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 OR8H1Q8NGG4 311 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 SMAP2Q8WU79 429 aaPredicted RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 GATAD1Q8WUU5 269 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 CASP10Q92851 521 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 NXPE2Q96DL1 559 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 OMA1Q96E52 524 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 GMPPAQ96IJ6 420 aaPredicted RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 NECTIN4Q96NY8 510 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 RUFY1Q96T51 708 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 PCDHB18PQ96TA0 734 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 PI4K2AQ9BTU6 479 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 ABCG8Q9H221 673 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 MTIF3Q9H2K0 278 aaKnown RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 C5orf66Q9H5L9 145 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 ATP13A3Q9H7F0 1226 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 DNAJC11Q9NVH1 559 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 FOXA2Q9Y261 457 aaPredicted RBP3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 TMED7Q9Y3B3 224 aa3.54□□□□□ -1.84
C1GALT1-202ENST00000402468 GPRASP1Q5JY77 1395 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 A0A087WZ39 114 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 TMEM129A0AVI4 362 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 MSGN1A6NI15 193 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 SURF4O15260 269 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 ATP6V1G1O75348 118 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 SAP30O75446 220 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 NXPH2O95156 264 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 MT-ND2P03891 347 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 CD48P09326 243 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 CEACAM1P13688 526 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 CEBPBP17676 345 aa3.53□□□□□ -1.84
C1GALT1-202ENST00000402468 CLCN4P51793 760 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms