RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 GLYATQ6IB77 296 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 ADGRD1Q6QNK2 874 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 BMP8AQ7Z5Y6 402 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 IQCHQ86VS3 1027 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 ESX1Q8N693 406 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 DDHD1Q8NEL9 900 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.68□□□□□ -1.182e-8■■■■■ 29.1
USP47-203ENST00000399455 RBCK1Q9BYM8 510 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 YIPF3Q9GZM5 350 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 NUAK2Q9H093 628 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SLC40A1Q9NP59 571 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 BATF3Q9NR55 127 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SLC6A14Q9UN76 642 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 OR51F1A6NGY5 319 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 HMGN1P05114 100 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 HOXA11P31270 313 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 MAP3K8P41279 467 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 IRF4Q15306 451 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 KLHL22Q53GT1 634 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 PGM2L1Q6PCE3 622 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 GK5Q6ZS86 529 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 FAM47BQ8NA70 645 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 NXT1Q9UKK6 140 aaKnown RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 A0A087WXM4 84 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 HCRTO43612 131 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SCO2O43819 266 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CDC123O75794 336 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 C1GALT1C1LP0DN25 315 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 UQCRC2P22695 453 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GBX2P52951 348 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 SLC34A1Q06495 639 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CCNIQ14094 377 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 TRIM16LQ309B1 348 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CCDC92Q53HC0 331 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 SMARCD3Q6STE5 483 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SUSD1Q6UWL2 747 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ENPP6Q6UWR7 440 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GPALPP1Q8IXQ4 340 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 LSMEM2Q8N112 164 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GALNT15Q8N3T1 639 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GEMIN6Q8WXD5 167 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 SH3GL2Q99962 352 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 BRF2Q9HAW0 419 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 NSG1A0A0A6YYJ2 146 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PLK4O00444 970 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SLC22A2O15244 555 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 HCRTR2O43614 444 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 WDPCPO95876 746 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CLPTM1O96005 669 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 MTHFD1P11586 935 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 GJA4P35212 333 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 EMP2P54851 167 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CHAF1BQ13112 559 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 DDI2Q5TDH0 399 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 NAPRTQ6XQN6 538 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GAREM2Q75VX8 874 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GSTCDQ8NEC7 633 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 IGSF8Q969P0 613 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PYCR2Q96C36 320 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 FRMD6Q96NE9 622 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ZFYVE21Q9BQ24 234 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 EMC3Q9P0I2 261 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 LINC00854A0A1B0GVQ3 168 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 LOC110117498-PIK3R3F6TDL0 507 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 H7BY64 318 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PSIP1O75475 530 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 IGFBP5P24593 272 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CDK9P50750 372 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 ERVFC1P60507 584 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 RIPK1Q13546 671 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ZNF460Q14592 562 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 OR4C11Q6IEV9 310 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 KLHL17Q6TDP4 642 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ARHGAP12Q8IWW6 846 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SPPL3Q8TCT6 385 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 THAP3Q8WTV1 239 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 PIK3R3Q92569 461 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ANKRD27Q96NW4 1050 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PRAP1Q96NZ9 151 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SLC39A3Q9BRY0 314 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 KLHL31Q9H511 634 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CDH20Q9HBT6 801 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 M0R2N6 131 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CCRL2O00421 344 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PROM1O43490 865 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 RPLP0P05388 317 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 SRCP12931 536 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SPINT3P49223 89 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 CNTD1Q8N815 330 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 TEX19Q8NA77 164 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 OR6K6Q8NGW6 343 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 BBS10Q8TAM1 723 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SHKBP1Q8TBC3 707 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 BORCS8Q96FH0 119 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 PPM1MQ96MI6 270 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 SSU72Q9NP77 194 aaKnown RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 TMEM138Q9NPI0 162 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 ACTR10Q9NZ32 417 aa7.67□□□□□ -1.18
USP47-203ENST00000399455 GLSO94925 669 aaPredicted RBP7.67□□□□□ -1.18
USP47-203ENST00000399455 UBOX5O94941 541 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms