RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 NDUFAF1Q9Y375 327 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 HRH3Q9Y5N1 445 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PLXNA1Q9UIW2 1896 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TEX13CA0A0J9YWL9 993 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 RFPL4AA6NLU0 287 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 RFPL4AL1F8VTS6 287 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ERVH48-1M5A8F1 160 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM189A1O60320 539 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PCDHGA12O60330 932 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CNTN5O94779 1100 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PEX11BO96011 259 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ZDHHC11BP0C7U3 371 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 THRAP10827 490 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ADRB3P13945 408 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CORO1AP31146 461 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SPRP35270 261 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 GRIA2P42262 883 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CDK9P50750 372 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC6A3Q01959 620 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SP2Q02086 613 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CD300CQ08708 224 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF460Q14592 562 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM132DQ14C87 1099 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PDK3Q15120 406 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 NR6A1Q15406 480 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TOMM34Q15785 309 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 GOLGA7BQ2TAP0 167 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ACTBL2Q562R1 376 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TOR2AQ5JU69 321 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 C16orf46Q6P387 395 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 FBXO42Q6P3S6 717 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CES3Q6UWW8 571 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 VWA5B2Q8N398 1253 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 EFCAB3Q8N7B9 438 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 REPS2Q8NFH8 660 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 GPR150Q8NGU9 434 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 BRI3BPQ8WY22 251 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TP53INP1Q96A56 240 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 C12orf42Q96LP6 360 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 QKIQ96PU8 341 aaKnown RBP eCLIP6.36□□□□□ -1.391e-11■■■■□ 21.4
TM9SF4-202ENST00000398022 SOX7Q9BT81 388 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PRRG3Q9BZD7 231 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MAT2BQ9NZL9 334 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 STOML2Q9UJZ1 356 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PRPF19Q9UMS4 504 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CCL27Q9Y4X3 112 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PCDHGA7Q9Y5G6 932 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PCDHGA6Q9Y5G7 932 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PSAT1Q9Y617 370 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 C5orf42Q9H799 3197 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 WDR27A2RRH5 827 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PIK3R2O00459 728 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 HUS1O60921 280 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 LYPLA1O75608 230 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TGFAP01135 160 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 IGHV2-70P01814 119 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SERPINA5P05154 406 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PCCBP05166 539 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 HCKP08631 526 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 STAG3L1P0CL83 205 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 EN2P19622 333 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CPOXP36551 454 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 RPL5P46777 297 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SESN2P58004 480 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TSPAN31Q12999 210 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 ZRANB3Q5FWF4 1079 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MEDAGQ5VYS4 303 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MFSD14CQ5VZR4 134 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SYCE2Q6PIF2 218 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TMIGD1Q6UXZ0 262 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 COLCA1Q6ZS62 124 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MCATQ8IVS2 390 aaKnown RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 METTL4Q8N3J2 472 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PQLC3Q8N755 202 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 C1orf127Q8N9H9 656 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MITD1Q8WV92 249 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CPNE1Q99829 537 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 RTKNQ9BST9 563 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TRAF4Q9BUZ4 470 aaPredicted RBP6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM106CQ9BVX2 250 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CD244Q9BZW8 370 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 BTBD1Q9H0C5 482 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 CDT1Q9H211 546 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 SH3BP4Q9P0V3 963 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 MLXQ9UH92 298 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 C3orf18Q9UK00 162 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 PSMD13Q9UNM6 376 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 POMPQ9Y244 141 aa6.36□□□□□ -1.39
TM9SF4-202ENST00000398022 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 NR5A2O00482 541 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ADAMDEC1O15204 470 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 DPM1O60762 260 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 RNASEH1O60930 286 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 C1QAP02745 245 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 IFNA4P05014 189 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 LINC00614P0C842 121 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 CYP2C8P10632 490 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 FGF3P11487 239 aaPredicted RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 COX4I1P13073 169 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms