RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 FAM53BQ14153 422 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 ARHGAP40Q5TG30 622 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 BROXQ5VW32 411 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 PRMT9Q6P2P2 845 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 COX15Q7KZN9 410 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 PDSS2Q86YH6 399 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 TLCD1Q96CP7 247 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 CPNE5Q9HCH3 593 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 PCDHGA11Q9Y5H2 935 aa24.09■■□□□ 1.45
TMEM55B-202ENST00000398020 SGK494L7N484 410 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 SASH3O75995 380 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 OR4F21O95013 312 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 GSTM2P28161 218 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 NEK2P51955 445 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 LCP2Q13094 533 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 NCF4Q15080 339 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 DEFB134Q4QY38 66 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 SYVN1Q86TM6 617 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 TMEM151BQ8IW70 566 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 SHISA5Q8N114 240 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 HUS1BQ8NHY5 278 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 UTP15Q8TED0 518 aaKnown RBP24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 ZNF473Q8WTR7 871 aaKnown RBP24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 MTFMTQ96DP5 389 aaKnown RBP24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 MVB12AQ96EY5 273 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 PKNOX2Q96KN3 472 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 ACTL8Q9H568 366 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 VIPAS39Q9H9C1 493 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 ANKHQ9HCJ1 492 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 GPN3Q9UHW5 284 aaPredicted RBP24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 NAALAD2Q9Y3Q0 740 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 SLC22A7Q9Y694 548 aa24.08■■□□□ 1.45
TMEM55B-202ENST00000398020 LRIT2A6NDA9 550 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 ZNF860A6NHJ4 632 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 C21orf140B9A014 251 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 H0YIV9 168 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 TRIM13O60858 407 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 CNOT3O75175 753 aaKnown RBP24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 FBLP22087 321 aaKnown RBP24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 RPS15P62841 145 aaKnown RBP24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 MAT1AQ00266 395 aaKnown RBP24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 SYT16Q17RD7 645 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 CCDC81Q6ZN84 652 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 FRMD7Q6ZUT3 714 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 SEC16BQ96JE7 1060 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 ZNF382Q96SR6 550 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 YIPF2Q9BWQ6 316 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 GATA5Q9BWX5 397 aaPredicted RBP24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 SHCBP1LQ9BZQ2 653 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 MLXIPLQ9NP71 852 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 CTSFQ9UBX1 484 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 CDC14AQ9UNH5 594 aa24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 FARSAQ9Y285 508 aaKnown RBP24.08■■□□□ 1.44
TMEM55B-202ENST00000398020 ITPR1Q14643 2758 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 A0A0G2JN53 185 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 UBFD1O14562 309 aaKnown RBP24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 PRPF4O43172 522 aaKnown RBP eCLIP24.07■■□□□ 1.441e-7■■■□□ 16.5
TMEM55B-202ENST00000398020 MLYCDO95822 493 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 TGFB1P01137 390 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 ALOX12P18054 663 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 AVPR1BP47901 424 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 TTC19Q6DKK2 380 aaPredicted RBP24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 ZCCHC23Q6ZST2 131 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 GPRIN3Q6ZVF9 776 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 ABHD13Q7L211 337 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 CDYL2Q8N8U2 506 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 AMER3Q8N944 861 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 ANKRD42Q8N9B4 389 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 MS4A6EQ96DS6 147 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 CRELD1Q96HD1 420 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 F2RL3Q96RI0 385 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 KCND3Q9UK17 655 aa24.07■■□□□ 1.44
TMEM55B-202ENST00000398020 WDR91A4D1P6 747 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 ERI3O43414 337 aaKnown RBP24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 KLHL18O94889 574 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 NSA2O95478 260 aaKnown RBP24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 PTPN4P29074 926 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 STXBP1P61764 594 aaKnown RBP24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 HERC3Q15034 1050 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 SHISA6Q6ZSJ9 500 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 OVCH1Q7RTY7 1134 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 AFAP1L2Q8N4X5 818 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 WDR20Q8TBZ3 569 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 STARD8Q92502 1023 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 REPS1Q96D71 796 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 MS4A8Q9BY19 250 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 GPR87Q9BY21 358 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 REXO4Q9GZR2 422 aaKnown RBP24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 MID1IP1Q9NPA3 183 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 ZNF446Q9NWS9 450 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 HCN3Q9P1Z3 774 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 CCDC88CQ9P219 2028 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 MGAQ8IWI9 3026 aa24.06■■□□□ 1.44
TMEM55B-202ENST00000398020 TMEM120BA0PK00 339 aa24.05■■□□□ 1.44
TMEM55B-202ENST00000398020 URADA6NGE7 173 aa24.05■■□□□ 1.44
TMEM55B-202ENST00000398020 SAP18O00422 153 aaKnown RBP24.05■■□□□ 1.44
TMEM55B-202ENST00000398020 TM9SF1O15321 606 aa24.05■■□□□ 1.44
TMEM55B-202ENST00000398020 RDH16O75452 317 aa24.05■■□□□ 1.44
TMEM55B-202ENST00000398020 BPGMP07738 259 aa24.05■■□□□ 1.44
TMEM55B-202ENST00000398020 PIM1P11309 404 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms