RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 STC2O76061 302 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 ZNF19P17023 458 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 SCGB2B2Q4G0G5 96 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 PDPRQ8NCN5 879 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 ZDHHC1Q8WTX9 485 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 OTUB2Q96DC9 234 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 DERL2Q9GZP9 239 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 RBM47A0AV96 593 aaKnown RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 SELENOVP59797 346 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 FOXK1P85037 733 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 SLC35F1Q5T1Q4 408 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 P2RY8Q86VZ1 359 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 TMEM139Q8IV31 216 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 OR4K14Q8NGD5 310 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 OR56A1Q8NGH5 318 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 GRHL1Q9NZI5 618 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 MBD2Q9UBB5 411 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 DLGAP4Q9Y2H0 992 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 OR1E2P47887 323 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 RAB39AQ14964 217 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 FOXRED2Q8IWF2 684 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 WDR60Q8WVS4 1066 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 FBRSL1Q9HCM7 1045 aaKnown RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 SUSD2Q9UGT4 822 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 TMEM25Q86YD3 366 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 UHRF1Q96T88 793 aaPredicted RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 CPEB1Q9BZB8 566 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 HSPA12AO43301 675 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PEX2P28328 305 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 KCNJ11Q14654 390 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 GEMIN6Q8WXD5 167 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 HSPBAP1Q96EW2 488 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 BORCS8Q96FH0 119 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 AHSA1O95433 338 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 CYBAP13498 195 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 CD70P32970 193 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 DEFB103AP81534 67 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 ELAVL3Q14576 367 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 ZC3H14Q6PJT7 736 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 CRELD2Q6UXH1 353 aaPredicted RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 KBTBD6Q86V97 674 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 CCNL2Q96S94 520 aaPredicted RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 NID2Q14112 1375 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 VILLO15195 856 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 AP3S2P59780 193 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PAFAH1B3Q15102 231 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 DRICH1Q6PGQ1 229 aaPredicted RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 TMEM107Q6UX40 140 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 ZC3HC1Q86WB0 502 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 ZNF100Q8IYN0 542 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 LGI4Q8N135 537 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 KLHL36Q8N4N3 616 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 OR4K1Q8NGD4 311 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 TMEM74Q96NL1 305 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 CIB4A0PJX0 185 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PRH1P02810 166 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PLCXD2Q0VAA5 305 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PPP4R1LQ9P1A2 415 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PFKLP17858 780 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 GAL3ST3Q96A11 431 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 EFCAB9A8MZ26 197 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 AGPSO00116 658 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 H1F0P07305 194 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 MRPL3P09001 348 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 FAM214AQ32MH5 1076 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 TAS1R3Q7RTX0 852 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 CROCCP3Q8IVE0 287 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 AQP11Q8NBQ7 271 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 DNAAF1Q8NEP3 725 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 TMEM40Q8WWA1 233 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 ARSAP15289 507 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 AP2S1P53680 142 aaPredicted RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 HNRNPKP61978 463 aaKnown RBP eCLIP10.97□□□□□ -0.654e-7■■■■□ 23.3
TTC28-201ENST00000397906 DSC3Q14574 896 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 OR5T2Q8NGG2 359 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 GIMAP2Q9UG22 337 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 CEBPBP17676 345 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 GALNT2Q10471 571 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PEX11GQ96HA9 241 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 NODALQ96S42 347 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 NPY6RQ99463 290 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 POLR2J2Q9GZM3 115 aaKnown RBP10.97□□□□□ -0.65
TTC28-201ENST00000397906 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 MGAT4AQ9UM21 535 aa10.97□□□□□ -0.65
TTC28-201ENST00000397906 PDCD5O14737 125 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 CYP17A1P05093 508 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 FCHO2Q0JRZ9 810 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 RAB7BQ96AH8 199 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 CAMK1GQ96NX5 476 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 HERC2P3Q9BVR0 1158 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 C5orf51A6NDU8 294 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 TLR4O00206 839 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 SGCAQ16586 387 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 BEND4Q6ZU67 534 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 ZNF548Q8NEK5 533 aaPredicted RBP10.96□□□□□ -0.65
TTC28-201ENST00000397906 TNFRSF10DQ9UBN6 386 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 GLS2Q9UI32 602 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 DHFRP00374 187 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms