RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 GMPR2Q9P2T1 348 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 FTSJ1Q9UET6 329 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 CNOT11Q9UKZ1 510 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 EIF3LQ9Y262 564 aaKnown RBP14.3□□□□□ -0.12
CAPN3-207ENST00000397200 DTNAQ9Y4J8 743 aa14.3□□□□□ -0.12
CAPN3-207ENST00000397200 ASCC3Q8N3C0 2202 aaKnown RBP14.29□□□□□ -0.12
CAPN3-207ENST00000397200 PIPSLA2A3N6 862 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 EME2A4GXA9 379 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-207ENST00000397200 BTN3A3O00478 584 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 GDF9O60383 454 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 PRAMEF4O60810 478 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 DNAJA2O60884 412 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 PROS1P07225 676 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 UQCRBP14927 111 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 PNLIPP16233 465 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 E2F2Q14209 437 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 NR1D2Q14995 579 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 PRAMEF9Q5VWM5 478 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 PRAMEF13Q5VWM6 474 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 ARMC6Q6NXE6 501 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 GUSBP11Q6P575 273 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 DLEU7Q6UYE1 221 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 ADGRF3Q8IZF5 1079 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 FCRL1Q96LA6 429 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 PCBD2Q9H0N5 130 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 COPS7BQ9H9Q2 264 aaPredicted RBP14.29□□□□□ -0.12
CAPN3-207ENST00000397200 IL1RL2Q9HB29 575 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 HRASLS2Q9NWW9 162 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 C1orf109Q9NX04 203 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 SNX6Q9UNH7 406 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 SLC22A14Q9Y267 594 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 AP4S1Q9Y587 144 aa14.29□□□□□ -0.12
CAPN3-207ENST00000397200 GSAPA4D1B5 854 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 OR5K3A6NET4 321 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 ISM1B1AKI9 464 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 SH3BP5O60239 455 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
CAPN3-207ENST00000397200 PDYNP01213 254 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 TYRP1P17643 537 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 POLR2CP19387 275 aaPredicted RBP14.28□□□□□ -0.12
CAPN3-207ENST00000397200 GSK3BP49841 420 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 OR1D5P58170 312 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 HMGCS1Q01581 520 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 KIR2DS3Q14952 304 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 STPG1Q5TH74 334 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 LCTLQ6UWM7 567 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 Q8N9G6 341 aaPredicted RBP14.28□□□□□ -0.12
CAPN3-207ENST00000397200 RSC1A1Q92681 617 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 SLC22A18Q96BI1 424 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 AHCYL2Q96HN2 611 aaKnown RBP14.28□□□□□ -0.12
CAPN3-207ENST00000397200 HAUS8Q9BT25 410 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 EPB41L1Q9H4G0 881 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 CLMPQ9H6B4 373 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 SPHK1Q9NYA1 384 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 RAPGEFL1Q9UHV5 662 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 DYRK1BQ9Y463 629 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 PCDHB11Q9Y5F2 797 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 ENTPD2Q9Y5L3 495 aa14.28□□□□□ -0.12
CAPN3-207ENST00000397200 EP300Q09472 2414 aaPredicted RBP14.27□□□□□ -0.12
CAPN3-207ENST00000397200 A0A1W2PPV9 198 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 A6NHS1 94 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 C2orf74A8MZ97 194 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 H0YJX3 145 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 STAMBPO95630 424 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 CKMT2P17540 419 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 HTR1EP28566 365 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 PEBP1P30086 187 aaKnown RBP14.27□□□□□ -0.12
CAPN3-207ENST00000397200 CAPZBP47756 277 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 GPLD1P80108 840 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 IMPG1Q17R60 797 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 LRRC36Q1X8D7 754 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 GRAMD1BQ3KR37 738 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 LIPJQ5W064 366 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 NANOGP8Q6NSW7 305 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 SLC2A7Q6PXP3 512 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 SPRED1Q7Z699 444 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 IFI44Q8TCB0 444 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 OR4K3Q96R72 315 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 ACAT2Q9BWD1 397 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 ALG2Q9H553 416 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 NANOGQ9H9S0 305 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 CCM2LQ9NUG4 571 aaPredicted RBP14.27□□□□□ -0.12
CAPN3-207ENST00000397200 ACTR10Q9NZ32 417 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 TAC3Q9UHF0 121 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 TMED5Q9Y3A6 229 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 KCNE2Q9Y6J6 123 aa14.27□□□□□ -0.12
CAPN3-207ENST00000397200 IGHV1OR21-1A0A087WYE8 117 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 MAGEA13PA6NCF6 341 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 ARPC2O15144 300 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 DUX1O43812 170 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 PRICKLE3O43900 615 aaPredicted RBP14.26□□□□□ -0.13
CAPN3-207ENST00000397200 JUPP14923 745 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 PSMB5P28074 263 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 LIPEQ05469 1076 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 PWP1Q13610 501 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 PTGR1Q14914 329 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CPSF6Q16630 551 aaKnown RBP eCLIP14.26□□□□□ -0.13
CAPN3-207ENST00000397200 RABL3Q5HYI8 236 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 PERM1Q5SV97 790 aa14.26□□□□□ -0.13
CAPN3-207ENST00000397200 CACHD1Q5VU97 1274 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms