RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SLC22A4Q9H015 551 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 LHX3Q9UBR4 397 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 SNX7Q9UNH6 387 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 PRKACBP22694 351 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 CTGFP29279 349 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 CSTF3Q12996 717 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 RFLNAQ6ZTI6 216 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 C7orf34Q96L11 122 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 MTERF1Q99551 399 aaKnown RBP23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 SRRQ9GZT4 340 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 NMRK2Q9NPI5 230 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 SLC6A14Q9UN76 642 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 PCDHGB3Q9Y5G1 929 aa23.11■■□□□ 1.29
CSNK1E-203ENST00000396832 H3BM21 787 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 ADRA2AP08913 450 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 MYL9P24844 172 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 PKLRP30613 574 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 KIR3DL1P43629 444 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 SCN1BQ07699 218 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 PTOV1Q86YD1 416 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 CCM2Q9BSQ5 444 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 A0A1W2PQ72 361 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 C2orf78A6NCI8 922 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 IL12RB1P42701 662 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 OR1E2P47887 323 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 SSX1Q16384 188 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 NATD1Q8N6N6 113 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 TTC9Q92623 222 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 MAP6Q96JE9 813 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 SPATA17Q96L03 361 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 TRPS1Q9UHF7 1281 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 SLC22A14Q9Y267 594 aa23.1■■□□□ 1.29
CSNK1E-203ENST00000396832 H7C0S8 307 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 YY2O15391 372 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 TBL1XO60907 577 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 MTX2O75431 263 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 STC2O76061 302 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 GABRB1P18505 474 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 SMARCB1Q12824 385 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 FAPQ12884 760 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 BOP1Q14137 746 aaKnown RBP23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 EFR3AQ14156 821 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 DOC2BQ14184 412 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 ADNP2Q6IQ32 1131 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 SLC5A8Q8N695 610 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 VANGL1Q8TAA9 524 aaPredicted RBP23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 ZFAND1Q8TCF1 268 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 RLIMQ9NVW2 624 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 Q9Y3F1 56 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 CFAP20Q9Y6A4 193 aaKnown RBP23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 A0A1B0GVM2 712 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 MYCP01106 439 aaPredicted RBP23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 CSF2P04141 144 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 ACPPP15309 386 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 BPIP17213 487 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 ITGALP20701 1170 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 SYT12Q8IV01 421 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 FAM20CQ8IXL6 584 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 DENND6BQ8NEG7 585 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 SH3KBP1Q96B97 665 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 NTMT1Q9BV86 223 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 ARHGAP39Q9C0H5 1083 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 PCDHGA2Q9Y5H1 932 aa23.09■■□□□ 1.29
CSNK1E-203ENST00000396832 A0A0B4J293 547 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 B4DXG7 233 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 COX7A2P14406 83 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 TUFMP49411 452 aaKnown RBP23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 KRT73Q86Y46 540 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 UBE2J2Q8N2K1 259 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 SPPL2AQ8TCT8 520 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 NELL1Q92832 810 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 RNF31Q96EP0 1072 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 FRMD6Q96NE9 622 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 IMPAD1Q9NX62 359 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 DUSP12Q9UNI6 340 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 PCM1Q15154 2024 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 TNFRSF11BO00300 401 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 PRAMEF4O60810 478 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 EPN2O95208 641 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 ANXA5P08758 320 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 UBL4AP11441 157 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 ACRV1P26436 265 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 ERP29P30040 261 aaKnown RBP23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 MLLT3P42568 568 aaPredicted RBP23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 GPRC6AQ5T6X5 926 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 PRAMEF9Q5VWM5 478 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 RDH10Q8IZV5 341 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 VWA5B2Q8N398 1253 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 C11orf54Q9H0W9 315 aaPredicted RBP23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 SNTG1Q9NSN8 517 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 SPEF1Q9Y4P9 236 aa23.08■■□□□ 1.29
CSNK1E-203ENST00000396832 GLYATL1P3A0A0U1RQE8 302 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 PXNP49023 591 aaPredicted RBP23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 TGM4P49221 684 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 KCNJ10P78508 379 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 PTCHD3Q3KNS1 767 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 ZNF648Q5T619 568 aaPredicted RBP23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 ERICH5Q6P6B1 374 aa23.07■■□□□ 1.28
CSNK1E-203ENST00000396832 C9orf43Q8TAL5 461 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms