RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 VPS29Q9UBQ0 182 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 GOLGA8QA0A0J9YX86 632 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 GOLGA8OA6NCC3 632 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 A8MU76 341 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 GOLGA8NF8WBI6 632 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 H0YGG7 62 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.98e-9■■■■□ 24.6
DDX39B-202ENST00000396172 MYO1DO94832 1006 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 DKK1O94907 266 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 SERPIND1P05546 499 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 FTH1P19P0C7X4 201 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 LINC00032P0C843 101 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ACPPP15309 386 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 EMP3P54852 163 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ARF3P61204 181 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 RPS13P62277 151 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CYP4F2P78329 520 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 INSM1Q01101 510 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ACSM2AQ08AH3 577 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TUBB3Q13509 450 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 GARNL3Q5VVW2 1013 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 KHDRBS2Q5VWX1 349 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CDCP2Q5VXM1 449 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ACSM2BQ68CK6 577 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 FBXO42Q6P3S6 717 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ZNF574Q6ZN55 896 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 PLD3Q8IV08 490 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 MCATQ8IVS2 390 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 FAM9CQ8IZT9 166 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CACTIN-AS1Q8N1I8 211 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CSNK1A1LQ8N752 337 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 MTFMTQ96DP5 389 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TM4SF19Q96DZ7 209 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 LIN37Q96GY3 246 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 QRFPRQ96P65 431 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CMKLR1Q99788 373 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 RTKNQ9BST9 563 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ACPTQ9BZG2 426 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TCF7L2Q9NQB0 619 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ENAMQ9NRM1 1142 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 FARSBQ9NSD9 589 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 C1orf109Q9NX04 203 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TOR4AQ9NXH8 423 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 DCTN4Q9UJW0 460 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 SERTAD3Q9UJW9 196 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 KNTC1P50748 2209 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 SCN2AQ99250 2005 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 TMEM150CB9EJG8 249 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 SDHDO14521 159 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 ZNF195O14628 629 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 LCMT2O60294 686 aaKnown RBP9.42□□□□□ -0.9
DDX39B-202ENST00000396172 HNRNPCL1O60812 293 aaKnown RBP9.42□□□□□ -0.9
DDX39B-202ENST00000396172 LBPP18428 481 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 GSTM5P46439 218 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 NOVA1P51513 510 aaKnown RBP9.42□□□□□ -0.9
DDX39B-202ENST00000396172 NEK2P51955 445 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 ITGA1P56199 1179 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 VSX2P58304 361 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-202ENST00000396172 GRM7Q14831 915 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 DEFB110Q30KQ9 67 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 ADPRMQ3LIE5 342 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 DEPDC1Q5TB30 811 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 OGFOD2Q6N063 350 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 TMPRSS9Q7Z410 1059 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 VN1R4Q7Z5H5 301 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 OR2L5Q8NG80 312 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 CREB3L4Q8TEY5 395 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 RGMAQ96B86 450 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 RILPQ96NA2 401 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 ZNF285Q96NJ3 590 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 KCNC2Q96PR1 638 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 TMEM120AQ9BXJ8 343 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 SLC6A16Q9GZN6 736 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 REXO4Q9GZR2 422 aaKnown RBP9.42□□□□□ -0.9
DDX39B-202ENST00000396172 MYLK2Q9H1R3 596 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 TUBB1Q9H4B7 451 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 COPS7BQ9H9Q2 264 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-202ENST00000396172 LRTM1Q9HBL6 345 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 FAM60AQ9NP50 221 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 FGF21Q9NSA1 209 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 SRPK3Q9UPE1 567 aa9.42□□□□□ -0.9
DDX39B-202ENST00000396172 TM4SF5O14894 197 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 LSM1O15116 133 aaKnown RBP9.41□□□□□ -0.9
DDX39B-202ENST00000396172 NRP2O60462 931 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 OR2B3O76000 313 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 MT-CO3P00414 261 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 TGFB1P01137 390 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 EIF2S1P05198 315 aaKnown RBP9.41□□□□□ -0.9
DDX39B-202ENST00000396172 GABRA4P48169 554 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 IDH3AP50213 366 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 ARSFP54793 590 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 RAB15P59190 212 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 ERVK-8P63133 956 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 SIM1P81133 766 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-202ENST00000396172 IL11RAQ14626 422 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 HERC3Q15034 1050 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 FAM214AQ32MH5 1076 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 TOR1AIP1Q5JTV8 583 aa9.41□□□□□ -0.9
DDX39B-202ENST00000396172 NXNQ6DKJ4 435 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms