RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 STXBP1P61764 594 aaKnown RBP6.32□□□□□ -1.4
BDNF-203ENST00000395978 SKP1P63208 163 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 PMS2P3Q13401 168 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 IRAK1BP1Q5VVH5 260 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 HMBOX1Q6NT76 420 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 REEP3Q6NUK4 255 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 DPPA4Q7L190 304 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 ZNF438Q7Z4V0 828 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 GPR149Q86SP6 731 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 SLC22A15Q8IZD6 547 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 HS3ST5Q8IZT8 346 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 ZNF548Q8NEK5 533 aaPredicted RBP6.32□□□□□ -1.4
BDNF-203ENST00000395978 OR10G6Q8NH81 332 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 CNIH3Q8TBE1 160 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 FRS2Q8WU20 508 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 RERGQ96A58 199 aaPredicted RBP6.32□□□□□ -1.4
BDNF-203ENST00000395978 ZFYVE19Q96K21 471 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 PRAP1Q96NZ9 151 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 IL17FQ96PD4 163 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 CHCHD6Q9BRQ6 235 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 CLEC4EQ9ULY5 219 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 PLAGL1Q9UM63 463 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 HCN4Q9Y3Q4 1203 aa6.32□□□□□ -1.4
BDNF-203ENST00000395978 PARP14Q460N5 1801 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 PSMD11O00231 422 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SCAMP1O15126 338 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CAPN5O15484 640 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 CLPXO76031 633 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 NAT1P18440 290 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 NOS3P29474 1203 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 OR1E2P47887 323 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CRISP3P54108 245 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 RPP38P78345 283 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 KCNC4Q03721 635 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 PIGFQ07326 219 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 VEZF1Q14119 521 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 LRRC32Q14392 662 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 GRIN2CQ14957 1233 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SNAPC1Q16533 368 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 TIGD6Q17RP2 521 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 GGTA1PQ4G0N0 100 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 IQCCQ4KMZ1 466 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SHQ1Q6PI26 577 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 DLEU7Q6UYE1 221 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 COMMD6Q7Z4G1 85 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 GALNT10Q86SR1 603 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SERPINA11Q86U17 422 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 DCP2Q8IU60 420 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 L3MBTL4Q8NA19 623 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SLCO4A1Q96BD0 722 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 LYSMD1Q96S90 227 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 UHRF1Q96T88 793 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 BRF2Q9HAW0 419 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 IL21Q9HBE4 155 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 RPS6KB2Q9UBS0 482 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 EBF1Q9UH73 591 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 INTS6Q9UL03 887 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 ACSL5Q9ULC5 683 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SSR3Q9UNL2 185 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CCL26Q9Y258 94 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CEPT1Q9Y6K0 416 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 PIPSLA2A3N6 862 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 EFCAB9A8MZ26 197 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 ZNF701M0R085 212 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 PLOD2O00469 737 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 ERI3O43414 337 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 PAK4O96013 591 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 BCHEP06276 602 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 IL3P08700 152 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 HPGDP15428 266 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SYN1P17600 705 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CSNK2A2P19784 350 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 LHCGRP22888 699 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 PSMA1P25786 263 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 GDI1P31150 447 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 MAGEA10P43363 369 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 CCT3P49368 545 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 EIF2B2P49770 351 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 C2orf27AQ580R0 203 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 PDZK1Q5T2W1 519 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CPZQ66K79 652 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 RTL10Q7L3V2 364 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 ZNF554Q86TJ5 538 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SMARCD2Q92925 531 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 NEIL2Q969S2 332 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CCDC115Q96NT0 180 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 MAPKAP1Q9BPZ7 522 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 ZBP1Q9H171 429 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 EHD1Q9H4M9 534 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 DNAAF2Q9NVR5 837 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 EHD3Q9NZN3 535 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 CALML5Q9NZT1 146 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SLC1A7O00341 560 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 MITFO75030 526 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 H1F0P07305 194 aaKnown RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 SLC35G6P0C7Q6 338 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 ADRB3P13945 408 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 BMP7P18075 431 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 GSTM2P28161 218 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms