RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 COQ3Q9NZJ6 369 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF175Q9Y473 711 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 BPTFQ12830 3046 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 FZD6O60353 706 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 RAF1P04049 648 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 CNPP09543 421 aaKnown RBP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 ITGA1P56199 1179 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 DAB2P98082 770 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 CSTF3Q12996 717 aaKnown RBP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 VEPH1Q14D04 833 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 ALG1LQ6GMV1 187 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 RGMBQ6NW40 437 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 RBFAQ8N0V3 343 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 PDXPQ96GD0 296 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 NECTIN4Q96NY8 510 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 CPPED1Q9BRF8 314 aaPredicted RBP18.19■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF224Q9NZL3 707 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 PCDH10Q9P2E7 1040 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 PHF11Q9UIL8 331 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 RNF112Q9ULX5 631 aa18.19■□□□□ 0.5
HOXC6-202ENST00000394331 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 MYO1GB0I1T2 1018 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 FABP3P05413 133 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 GABRB1P18505 474 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 TACR2P21452 398 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 ITGB7P26010 798 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 PTPRCAPQ14761 206 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 TSTQ16762 297 aaKnown RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 KLHL12Q53G59 568 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 ZZZ3Q8IYH5 903 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 CDKN2AIPNLQ96HQ2 116 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 SAMD11Q96NU1 681 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 PDFQ9HBH1 243 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 MCUBQ9NWR8 336 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 GPR83Q9NYM4 423 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 CNOT2Q9NZN8 540 aaKnown RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF490Q9ULM2 529 aaPredicted RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 SAMHD1Q9Y3Z3 626 aaKnown RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 DOCK4Q8N1I0 1966 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 LINC00854A0A1B0GVQ3 168 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 A0A1W2PRG6 482 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF670-ZNF695F2Z2N8 137 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 F5H5T6 163 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 WNT9AO14904 365 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 PER2O15055 1255 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 GJB3O75712 270 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 CSF2P04141 144 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 BMP8BP34820 402 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF33BQ06732 778 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 ST3GAL4Q11206 333 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 MRPL58Q14197 206 aaKnown RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 LARS2Q15031 903 aaKnown RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 SSX1Q16384 188 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 TMEM81Q6P7N7 255 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 BMP8AQ7Z5Y6 402 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 FAM120BQ96EK7 910 aaKnown RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 EPYCQ99645 322 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 PIGUQ9H490 435 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 IFT22Q9H7X7 185 aa18.18■□□□□ 0.5
HOXC6-202ENST00000394331 KLF2Q9Y5W3 355 aaPredicted RBP18.18■□□□□ 0.5
HOXC6-202ENST00000394331 TNFRSF21O75509 655 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 C9P02748 559 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 ATF6P18850 670 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 ABHD18Q0P651 414 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 AKAP1Q92667 903 aaKnown RBP eCLIP18.17■□□□□ 0.5
HOXC6-202ENST00000394331 CUEDC1Q9NWM3 386 aaPredicted RBP18.17■□□□□ 0.5
HOXC6-202ENST00000394331 TAS2R13Q9NYV9 303 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 TUBAL3A6NHL2 446 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 ORC5O43913 435 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 ECI2O75521 394 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 WDPCPO95876 746 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 HLA-FP30511 346 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 CRISP3P54108 245 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 DBPQ10586 325 aaPredicted RBP18.17■□□□□ 0.5
HOXC6-202ENST00000394331 LRIF1Q5T3J3 769 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 NADSYN1Q6IA69 706 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 SCIMPQ6UWF3 145 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 GCNT7Q6ZNI0 430 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 OR7G3Q8NG95 312 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 MAGEH1Q9H213 219 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 HEXA-AS1Q9H8Q6 139 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 REEP1Q9H902 201 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 EVA1BQ9NVM1 165 aa18.17■□□□□ 0.5
HOXC6-202ENST00000394331 NLE1Q9NVX2 485 aaPredicted RBP18.17■□□□□ 0.5
HOXC6-202ENST00000394331 FABP12A6NFH5 140 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 PGRP06401 933 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 PIRTP0C851 137 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 HSMCR30P0CW71 290 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 CKBP12277 381 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 GPC1P35052 558 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 RBBP7Q16576 425 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 TTLL9Q3SXZ7 439 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 HABP4Q5JVS0 413 aaKnown RBP18.16■□□□□ 0.5
HOXC6-202ENST00000394331 ZNF605Q86T29 641 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 MARC2Q969Z3 335 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 ZSWIM3Q96MP5 696 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 TRIB3Q96RU7 358 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 MGME1Q9BQP7 344 aa18.16■□□□□ 0.5
HOXC6-202ENST00000394331 RANBP3Q9H6Z4 567 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms