RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 FOXD4Q12950 439 aaPredicted RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 TAF12Q16514 161 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 ZNF628Q5EBL2 1059 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 LRFN4Q6PJG9 635 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 METTL7BQ6UX53 244 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 CHMP1BQ7LBR1 199 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 GOLGA7Q7Z5G4 137 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 DDX53Q86TM3 631 aaKnown RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 ZNF655Q8N720 491 aaPredicted RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 OR11H7Q8NGC8 314 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 OR52J3Q8NH60 311 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 IMP4Q96G21 291 aaKnown RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 C7orf34Q96L11 122 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 DPH2Q9BQC3 489 aaPredicted RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 CLEC4MQ9H2X3 399 aaPredicted RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 ZNF408Q9H9D4 720 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 CATSPERZQ9NTU4 200 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 SSR3Q9UNL2 185 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 LSM2Q9Y333 95 aaKnown RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 COL11A1P12107 1806 aaPredicted RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 VTNP04004 478 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 CHRM5P08912 532 aaPredicted RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 PIRTP0C851 137 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 GPR85P60893 370 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 RAB14P61106 215 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 LGALSLQ3ZCW2 172 aaPredicted RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 FBXO47Q5MNV8 452 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 CBLL1Q75N03 491 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 DNAJC5GQ8N7S2 189 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 OR7G3Q8NG95 312 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 NFKBIZQ9BYH8 718 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 SLC6A17Q9H1V8 727 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 PPP1R3EQ9H7J1 279 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 IL20Q9NYY1 176 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 SH3BP4Q9P0V3 963 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 MRPS7Q9Y2R9 242 aaKnown RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 A0A1B0GVM2 712 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 CELF2O95319 508 aaKnown RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 LGI1O95970 557 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 PPIGQ13427 754 aaKnown RBP eCLIP16.47■□□□□ 0.23
PTPA-207ENST00000393370 LRRC32Q14392 662 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 VMACQ2NL98 169 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 LIPKQ5VXJ0 399 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 C22orf42Q6IC83 251 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 TFAP2EQ6VUC0 442 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 LRRC17Q8N6Y2 441 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 TMEM203Q969S6 136 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 B3GALT6Q96L58 329 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 KLHL5Q96PQ7 755 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 ZIC5Q96T25 663 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 MED10Q9BTT4 135 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 MED28Q9H204 178 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 SLC35C2Q9NQQ7 365 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 TXNL4BQ9NX01 149 aaKnown RBP16.47■□□□□ 0.23
PTPA-207ENST00000393370 GPRC5BQ9NZH0 403 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 NCKAP1Q9Y2A7 1128 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 PCDHGB3Q9Y5G1 929 aa16.47■□□□□ 0.23
PTPA-207ENST00000393370 A0A1W2PPL8 197 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 PTP4A3O75365 173 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 MMP2P08253 660 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 POU2F1P14859 743 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 ITGALP20701 1170 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 CAV3P56539 151 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 SPHARQ15513 63 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 CCDC85BQ15834 202 aaPredicted RBP16.46■□□□□ 0.23
PTPA-207ENST00000393370 USP39Q53GS9 565 aaKnown RBP16.46■□□□□ 0.23
PTPA-207ENST00000393370 SGO1Q5FBB7 561 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 MSANTD2Q6P1R3 559 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 CNIH2Q6PI25 160 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 HSDL2Q6YN16 418 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 ADGRD2Q7Z7M1 963 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 PDZD3Q86UT5 571 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 C3orf58Q8NDZ4 430 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 C7orf57Q8NEG2 295 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 OR10G2Q8NGC3 310 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 OR4L1Q8NH43 312 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 EEF1AKMT1Q8WVE0 214 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 FOPNLQ96NB1 174 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 GPR20Q99678 358 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 SAV1Q9H4B6 383 aaPredicted RBP16.46■□□□□ 0.23
PTPA-207ENST00000393370 SERHL2Q9H4I8 314 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 ANKRA2Q9H9E1 313 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 POLMQ9NP87 494 aaPredicted RBP16.46■□□□□ 0.23
PTPA-207ENST00000393370 CNOT2Q9NZN8 540 aaKnown RBP16.46■□□□□ 0.23
PTPA-207ENST00000393370 COMMD3Q9UBI1 195 aa16.46■□□□□ 0.23
PTPA-207ENST00000393370 TSR3Q9UJK0 312 aaKnown RBP16.46■□□□□ 0.23
PTPA-207ENST00000393370 PRAMEF33A0A0G2JMD5 474 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 TNFRSF11BO00300 401 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 PRAMEF10O60809 474 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 KCNK5O95279 499 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 PRAMEF1O95521 474 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 IL1AP01583 271 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 SDC2P34741 201 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 CYP4F8P98187 520 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 C2orf80Q0P641 193 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 ZBTB6Q15916 424 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 TTLL9Q3SXZ7 439 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 RTL4Q6ZR62 310 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 TAC4Q86UU9 113 aa16.46■□□□□ 0.22
PTPA-207ENST00000393370 CLDN22Q8N7P3 220 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms