RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 AKTIPQ9H8T0 292 aa13.36□□□□□ -0.27
TCEA3-201ENST00000374601 LHX9Q9NQ69 397 aa13.36□□□□□ -0.27
TCEA3-201ENST00000374601 FGF21Q9NSA1 209 aa13.36□□□□□ -0.27
TCEA3-201ENST00000374601 CLCA2Q9UQC9 943 aa13.36□□□□□ -0.27
TCEA3-201ENST00000374601 KNTC1P50748 2209 aa13.36□□□□□ -0.27
TCEA3-201ENST00000374601 CACNA1AO00555 2505 aa13.36□□□□□ -0.27
TCEA3-201ENST00000374601 A0A1W2PNU3 283 aaPredicted RBP13.35□□□□□ -0.27
TCEA3-201ENST00000374601 FITM1A5D6W6 292 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 TMX2-CTNND1H3BSU7 103 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 PLPP1O14494 284 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 SNX3O60493 162 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 OR2B3O76000 313 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 FAM107AO95990 144 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 ZNF888P0CJ79 500 aaPredicted RBP13.35□□□□□ -0.27
TCEA3-201ENST00000374601 CCL4P13236 92 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 ITGA1P56199 1179 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 CBX1P83916 185 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 ACY1Q03154 408 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 COL9A2Q14055 689 aaPredicted RBP13.35□□□□□ -0.27
TCEA3-201ENST00000374601 TMEM35AQ53FP2 167 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 TCTE1Q5JU00 501 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 DEPDC1Q5TB30 811 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 TMEM214Q6NUQ4 689 aaKnown RBP13.35□□□□□ -0.27
TCEA3-201ENST00000374601 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 ZFAND4Q86XD8 727 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 METTL4Q8N3J2 472 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 OR2L5Q8NG80 312 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 ACTRT2Q8TDY3 377 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 TUBGCP3Q96CW5 907 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 C11orf24Q96F05 449 aaPredicted RBP13.35□□□□□ -0.27
TCEA3-201ENST00000374601 C10orf90Q96M02 699 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 OR6C1Q96RD1 312 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 SORBS1Q9BX66 1292 aaKnown RBP13.35□□□□□ -0.27
TCEA3-201ENST00000374601 STRADBQ9C0K7 418 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 REXO4Q9GZR2 422 aaKnown RBP13.35□□□□□ -0.27
TCEA3-201ENST00000374601 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 LRTM1Q9HBL6 345 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 PRM3Q9NNZ6 103 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 PFDN4Q9NQP4 134 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 RIC8BQ9NVN3 520 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 C1orf109Q9NX04 203 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 DLL3Q9NYJ7 618 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 VPS29Q9UBQ0 182 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 LOXL2Q9Y4K0 774 aa13.35□□□□□ -0.27
TCEA3-201ENST00000374601 A0A0G2JN53 185 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 RTCAO00442 366 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 ERI3O43414 337 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 PEX11AO75192 247 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 VPS4BO75351 444 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 B3GALT4O96024 378 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 SMIM10L1P0DMW3 83 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 BSGP35613 385 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 ARFIP2P53365 341 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 STXBP1P61764 594 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 RPL38P63173 70 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 RAE1P78406 368 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 MC2RQ01718 297 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 KIAA0040Q15053 153 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 AP5B1Q2VPB7 878 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 GALNTL6Q49A17 601 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 SPDYAQ5MJ70 313 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 C6orf136Q5SQH8 315 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 MANEAQ5SRI9 462 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 PRAMEF17Q5VTA0 474 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 OGFOD2Q6N063 350 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 ABHD17CQ6PCB6 329 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 CHSY3Q70JA7 882 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 COMMD6Q7Z4G1 85 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 CACTIN-AS1Q8N1I8 211 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 DTWD1Q8N5C7 304 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 ZNF655Q8N720 491 aaPredicted RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 CHTF18Q8WVB6 975 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 ADAMTS14Q8WXS8 1223 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 N4BP2L2Q92802 583 aaPredicted RBP13.34□□□□□ -0.27
TCEA3-201ENST00000374601 PMEPA1Q969W9 287 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 GAL3ST3Q96A11 431 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 SMIM10Q96HG1 83 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 PPP3R2Q96LZ3 170 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 QRFPRQ96P65 431 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 C17orf62Q9BQA9 187 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 CCDC28BQ9BUN5 200 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 NLNQ9BYT8 704 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 APMAPQ9HDC9 416 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 TCF7L2Q9NQB0 619 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 SPEGQ15772 3267 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 SEC16AO15027 2179 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 SDK2Q58EX2 2172 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 CROCCQ5TZA2 2017 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 CCDC88CQ9P219 2028 aa13.34□□□□□ -0.27
TCEA3-201ENST00000374601 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
TCEA3-201ENST00000374601 HYKKA2RU49 373 aa13.33□□□□□ -0.28
TCEA3-201ENST00000374601 DCDC2BA2VCK2 349 aa13.33□□□□□ -0.28
TCEA3-201ENST00000374601 B4E171 279 aa13.33□□□□□ -0.28
TCEA3-201ENST00000374601 TXNDC9O14530 226 aa13.33□□□□□ -0.28
TCEA3-201ENST00000374601 ZSCAN9O15535 394 aaPredicted RBP13.33□□□□□ -0.28
TCEA3-201ENST00000374601 EEDO75530 441 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms